Le Douarin NM, Teillet MA. Experimental analysis of the migration and differentiation of neuroblasts of the autonomic nervous system and of neurectodermal mesenchymal derivatives, using a biological cell marking technique. Dev Biol. 1974;41(1):162–84.
Article
PubMed
Google Scholar
Etchevers HC, Amiel J, Lyonnet S. Molecular bases of human neurocristopathies. Adv Exp Med Biol. 2006;589:213–34.
Article
CAS
PubMed
Google Scholar
Le Douarin N, Kalcheim C. The Neural Crest. 2nd ed. Cambridge: CambridgeUniversity Press; 1999.
Chapter
Google Scholar
Lumsden A, Krumlauf R. Patterning the vertebrate neuraxis. Science. 1996;274(5290):1109–15.
Article
CAS
PubMed
Google Scholar
Trainor PA, Krumlauf R. Hox genes, neural crest cells and branchial arch patterning. Curr Opin Cell Biol. 2001;13(6):698–705.
Article
CAS
PubMed
Google Scholar
Santagati F, Rijli FM. Cranial neural crest and the building of the vertebrate head. Nat Rev Neurosci. 2003;4(10):806–18.
Article
CAS
PubMed
Google Scholar
Davy A, Aubin J, Soriano P. Ephrin-B1 forward and reverse signaling are required during mouse development. Genes Dev. 2004;18(5):572–83.
Article
CAS
PubMed
PubMed Central
Google Scholar
Mellott DO, Burke RD. Divergent roles for Eph and ephrin in avian cranial neural crest. BMC Dev Biol. 2008;8:56.
Article
PubMed
PubMed Central
Google Scholar
Smith A, Robinson V, Patel K, Wilkinson DG. The EphA4 and EphB1 receptor tyrosine kinases and ephrin-B2 ligand regulate targeted migration of branchial neural crest cells. Curr Biol. 1997;7(8):561–70.
Article
CAS
PubMed
Google Scholar
Golding JP, Trainor P, Krumlauf R, Gassmann M. Defects in pathfinding by cranial neural crest cells in mice lacking the neuregulin receptor ErbB4. Nat Cell Biol. 2000;2(2):103–9.
Article
CAS
PubMed
Google Scholar
Olesnicky Killian EC, Birkholz DA, Artinger KB. A role for chemokine signaling in neural crest cell migration and craniofacial development. Dev Biol. 2009;333(1):161–72.
Article
CAS
PubMed
Google Scholar
Gammill LS, Gonzalez C, Bronner-Fraser M. Neuropilin 2/semaphorin 3F signaling is essential for cranial neural crest migration and trigeminal ganglion condensation. Dev Neurobiol. 2007;67(1):47–56.
Article
CAS
PubMed
Google Scholar
McLennan R, Kulesa PM. In vivo analysis reveals a critical role for neuropilin-1 in cranial neural crest cell migration in chick. Dev Biol. 2007;301(1):227–39.
Article
CAS
PubMed
Google Scholar
Ruhrberg C, Schwarz Q. In the beginning: Generating neural crest cell diversity. Cell Adh Migr. 2010;4(4):622–30.
Article
PubMed
PubMed Central
Google Scholar
Schwarz Q, Maden CH, Davidson K, Ruhrberg C. Neuropilin-mediated neural crest cell guidance is essential to organise sensory neurons into segmented dorsal root ganglia. Development. 2009;136(11):1785–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Schwarz Q, Vieira JM, Howard B, Eickholt BJ, Ruhrberg C. Neuropilin 1 and 2 control cranial gangliogenesis and axon guidance through neural crest cells. Development. 2008;135(9):1605–13.
Article
CAS
PubMed
PubMed Central
Google Scholar
Osborne NJ, Begbie J, Chilton JK, Schmidt H, Eickholt BJ. Semaphorin/neuropilin signaling influences the positioning of migratory neural crest cells within the hindbrain region of the chick. Dev Dyn. 2005;232(4):939–49.
Article
CAS
PubMed
Google Scholar
Schwarz Q, Ruhrberg C. Neuropilin, you gotta let me know: Should I stay or should I go? Cell Adh Migr. 2010;4(1).
Lumb R, Wiszniak S, Kabbara S, Scherer M, Harvey N, Schwarz Q. Neuropilins define distinct populations of neural crest cells. Neural Dev. 2014;9(1):24.
Article
PubMed
PubMed Central
Google Scholar
McLennan R, Teddy JM, Kasemeier-Kulesa JC, Romine MH, Kulesa PM. Vascular endothelial growth factor (VEGF) regulates cranial neural crest migration in vivo. Dev Biol. 2010; 339:114–25.
Schwarz Q, Waimey KE, Golding M, Takamatsu H, Kumanogoh A, Fujisawa H, Cheng HJ, Ruhrberg C. Plexin A3 and plexin A4 convey semaphorin signals during facial nerve development. Dev Biol. 2008;324(1):1–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Ruhrberg C. Growing and shaping the vascular tree: multiple roles for VEGF. Bioessays. 2003;25(11):1052–60.
Article
CAS
PubMed
Google Scholar
Schwarz Q, Gu C, Fujisawa H, Sabelko K, Gertsenstein M, Nagy A, Taniguchi M, Kolodkin AL, Ginty DD, Shima DT, et al. Vascular endothelial growth factor controls neuronal migration and cooperates with Sema3A to pattern distinct compartments of the facial nerve. Genes Dev. 2004;18(22):2822–34.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hunt P, Gulisano M, Cook M, Sham MH, Faiella A, Wilkinson D, Boncinelli E, Krumlauf R. A distinct Hox code for the branchial region of the vertebrate head. Nature. 1991;353(6347):861–4.
Article
CAS
PubMed
Google Scholar
Hunt P, Whiting J, Nonchev S, Sham MH, Marshall H, Graham A, Cook M, Allemann R, Rigby PW, Gulisano M, et al. The branchial Hox code and its implications for gene regulation, patterning of the nervous system and head evolution. Dev Suppl. 1991;Suppl 2:63–77.
CAS
PubMed
Google Scholar
Lewis AE, Vasudevan HN, O'Neill AK, Soriano P, Bush JO. The widely used Wnt1-Cre transgene causes developmental phenotypes by ectopic activation of Wnt signaling. Dev Biol. 2013;379(2):229–34.
Article
CAS
PubMed
PubMed Central
Google Scholar
Simoes-Costa M, Bronner ME. Insights into neural crest development and evolution from genomic analysis. Genome Res. 2013;23(7):1069–80.
Article
CAS
PubMed
PubMed Central
Google Scholar
Simoes-Costa M, Tan-Cabugao J, Antoshechkin I, Sauka-Spengler T, Bronner ME. Transcriptome analysis reveals novel players in the cranial neural crest gene regulatory network. Genome Res. 2014;24(2):281–90.
Article
CAS
PubMed
PubMed Central
Google Scholar
Bhattacherjee V, Mukhopadhyay P, Singh S, Johnson C, Philipose JT, Warner CP, Greene RM, Pisano MM. Neural crest and mesoderm lineage-dependent gene expression in orofacial development. Differentiation. 2007;75(5):463–77.
Article
CAS
PubMed
Google Scholar
Ito K, Morita T. Role of retinoic acid in mouse neural crest cell development in vitro. Dev Dyn. 1995;204(2):211–8.
Article
CAS
PubMed
Google Scholar
Cordero DR, Brugmann S, Chu Y, Bajpai R, Jame M, Helms JA. Cranial neural crest cells on the move: their roles in craniofacial development. Am J Med Genet A. 2010;155A(2):270–9.
PubMed
Google Scholar
Arenkiel BR, Gaufo GO, Capecchi MR. Hoxb1 neural crest preferentially form glia of the PNS. Dev Dyn. 2003;227(3):379–86.
Article
CAS
PubMed
Google Scholar
Brunskill EW, Potter AS, Distasio A, Dexheimer P, Plassard A, Aronow BJ, Potter SS. A gene expression atlas of early craniofacial development. Dev Biol. 2014;391(2):133–46.
Article
CAS
PubMed
PubMed Central
Google Scholar
Pachnis V, Mankoo B, Costantini F. Expression of the c-ret proto-oncogene during mouse embryogenesis. Development. 1993;119(4):1005–17.
CAS
PubMed
Google Scholar
Santagati F, Minoux M, Ren SY, Rijli FM. Temporal requirement of Hoxa2 in cranial neural crest skeletal morphogenesis. Development. 2005;132(22):4927–36.
Article
CAS
PubMed
Google Scholar
Kimura C, Takeda N, Suzuki M, Oshimura M, Aizawa S, Matsuo I. Cis-acting elements conserved between mouse and pufferfish Otx2 genes govern the expression in mesencephalic neural crest cells. Development. 1997;124(20):3929–41.
CAS
PubMed
Google Scholar
Lumb R, Schwarz Q. Sympathoadrenal neural crest cells: The known, unknown and forgotten? Dev Growth Differ. 2015;57(2):146-57.
Holz A, Kollmus H, Ryge J, Niederkofler V, Dias J, Ericson J, Stoeckli ET, Kiehn O, Arnold HH. The transcription factors Nkx2.2 and Nkx2.9 play a novel role in floor plate development and commissural axon guidance. Development. 2010;137(24):4249–60.
Article
CAS
PubMed
PubMed Central
Google Scholar
Ho Sui SJ, Mortimer JR, Arenillas DJ, Brumm J, Walsh CJ, Kennedy BP, Wasserman WW. oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes. Nucleic Acids Res. 2005;33(10):3154–64.
Article
PubMed
PubMed Central
Google Scholar
Castellani V, De Angelis E, Kenwrick S, Rougon G. Cis and trans interactions of L1 with neuropilin-1 control axonal responses to semaphorin 3A. EMBO J. 2002;21(23):6348–57.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hernandez-Miranda LR, Cariboni A, Faux C, Ruhrberg C, Cho JH, Cloutier JF, Eickholt BJ, Parnavelas JG, Andrews WD. Robo1 regulates semaphorin signaling to guide the migration of cortical interneurons through the ventral forebrain. J Neurosci. 2011;31(16):6174–87.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kumanogoh A, Watanabe C, Lee I, Wang X, Shi W, Araki H, Hirata H, Iwahori K, Uchida J, Yasui T, et al. Identification of CD72 as a lymphocyte receptor for the class IV semaphorin CD100: a novel mechanism for regulating B cell signaling. Immunity. 2000;13(5):621–31.
Article
CAS
PubMed
Google Scholar
Perala N, Sariola H, Immonen T. More than nervous: the emerging roles of plexins. Differentiation. 2012;83(1):77–91.
Article
PubMed
Google Scholar
Zhang S, Zhau HE, Osunkoya AO, Iqbal S, Yang X, Fan S, Chen Z, Wang R, Marshall FF, Chung LW, et al. Vascular endothelial growth factor regulates myeloid cell leukemia-1 expression through neuropilin-1-dependent activation of c-MET signaling in human prostate cancer cells. Mol Cancer. 2010;9:9.
Article
PubMed
PubMed Central
Google Scholar
Waimey KE, Huang PH, Chen M, Cheng HJ. Plexin-A3 and plexin-A4 restrict the migration of sympathetic neurons but not their neural crest precursors. Dev Biol. 2008;315(2):448–58.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sauka-Spengler T, Bronner-Fraser M. A gene regulatory network orchestrates neural crest formation. Nat Rev Mol Cell Biol. 2008;9(7):557–68.
Article
CAS
PubMed
Google Scholar
Beverdam A, Brouwer A, Reijnen M, Korving J, Meijlink F. Severe nasal clefting and abnormal embryonic apoptosis in Alx3/Alx4 double mutant mice. Development. 2001;128(20):3975–86.
CAS
PubMed
Google Scholar
Uz E, Alanay Y, Aktas D, Vargel I, Gucer S, Tuncbilek G, von Eggeling F, Yilmaz E, Deren O, Posorski N, et al. Disruption of ALX1 causes extreme microphthalmia and severe facial clefting: expanding the spectrum of autosomal-recessive ALX-related frontonasal dysplasia. Am J Hum Genet. 2010;86(5):789–96.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wulf E, Deboben A, Bautz FA, Faulstich H, Wieland T. Fluorescent phallotoxin, a tool for the visualization of cellular actin. Proc Natl Acad Sci U S A. 1979;76(9):4498–502.
Article
CAS
PubMed
PubMed Central
Google Scholar
Twigg SR, Versnel SL, Nurnberg G, Lees MM, Bhat M, Hammond P, Hennekam RC, Hoogeboom AJ, Hurst JA, Johnson D, et al. Frontorhiny, a distinctive presentation of frontonasal dysplasia caused by recessive mutations in the ALX3 homeobox gene. Am J Hum Genet. 2009;84(5):698–705.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zechi-Ceide RM, Rodrigues MG, Jehee FS, Kokitsu-Nakata NM, Passos-Bueno MR, Guion-Almeida ML. Saethre-Chotzen phenotype with learning disability and hyper IgE phenotype in a patient due to complex chromosomal rearrangement involving chromosomes 3 and 7. Am J Med Genet A. 2012;158A(7):1680–5.
Article
PubMed
Google Scholar
Kawakami Y, Esteban CR, Matsui T, Rodriguez-Leon J, Kato S, Izpisua Belmonte JC. Sp8 and Sp9, two closely related buttonhead-like transcription factors, regulate Fgf8 expression and limb outgrowth in vertebrate embryos. Development. 2004;131(19):4763–74.
Article
CAS
PubMed
Google Scholar
Zhang Q, Zhang Y, Wang C, Xu Z, Liang Q, An L, Li J, Liu Z, You Y, He M, et al. The Zinc Finger Transcription Factor Sp9 Is Required for the Development of Striatopallidal Projection Neurons. Cell Rep. 2016;16(5):1431–44.
Article
CAS
PubMed
Google Scholar
Kasberg AD, Brunskill EW, Steven Potter S. SP8 regulates signaling centers during craniofacial development. Dev Biol. 2013;381(2):312–23.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sandberg M, Kallstrom M, Muhr J. Sox21 promotes the progression of vertebrate neurogenesis. Nat Neurosci. 2005;8(8):995–1001.
Article
CAS
PubMed
Google Scholar
Kirilenko P, He G, Mankoo BS, Mallo M, Jones R, Bobola N. Transient activation of meox1 is an early component of the gene regulatory network downstream of hoxa2. Mol Cell Biol. 2011;31(6):1301–8.
Article
CAS
PubMed
PubMed Central
Google Scholar
Arenkiel BR, Tvrdik P, Gaufo GO, Capecchi MR. Hoxb1 functions in both motoneurons and in tissues of the periphery to establish and maintain the proper neuronal circuitry. Genes Dev. 2004;18(13):1539–52.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kam MK, Lui VC. Roles of Hoxb5 in the development of vagal and trunk neural crest cells. Dev Growth Differ. 2015;57(2):158–68.
Article
CAS
PubMed
Google Scholar
Plant MR, MacDonald ME, Grad LI, Ritchie SJ, Richman JM. Locally released retinoic acid repatterns the first branchial arch cartilages in vivo. Dev Biol. 2000;222(1):12–26.
Article
CAS
PubMed
Google Scholar
Natarajan D, Marcos-Gutierrez C, Pachnis V, de Graaff E. Requirement of signalling by receptor tyrosine kinase RET for the directed migration of enteric nervous system progenitor cells during mammalian embryogenesis. Development. 2002;129(22):5151–60.
CAS
PubMed
Google Scholar
Andang M, Hjerling-Leffler J, Moliner A, Lundgren TK, Castelo-Branco G, Nanou E, Pozas E, Bryja V, Halliez S, Nishimaru H, et al. Histone H2AX-dependent GABA(A) receptor regulation of stem cell proliferation. Nature. 2008;451(7177):460–4.
Article
PubMed
Google Scholar
Jiang X, Choudhary B, Merki E, Chien KR, Maxson RE, Sucov HM. Normal fate and altered function of the cardiac neural crest cell lineage in retinoic acid receptor mutant embryos. Mech Dev. 2002;117(1–2):115–22.
Article
CAS
PubMed
Google Scholar
Novak A, Guo C, Yang W, Nagy A, Lobe CG. Z/EG, a double reporter mouse line that expresses enhanced green fluorescent protein upon Cre-mediated excision. Genesis. 2000;28(3–4):147–55.
Article
CAS
PubMed
Google Scholar
Gammill LS, Gonzalez C, Gu C, Bronner-Fraser M. Guidance of trunk neural crest migration requires neuropilin 2/semaphorin 3F signaling. Development. 2006;133(1):99–106.
Article
CAS
PubMed
Google Scholar
Schwarz Q, Maden CH, Vieira JM, Ruhrberg C. Neuropilin 1 signaling guides neural crest cells to coordinate pathway choice with cell specification. Proc Natl Acad Sci U S A. 2009;106(15):6164–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Singh S, Bhattacherjee V, Mukhopadhyay P, Worth CA, Wellhausen SR, Warner CP, Greene RM, Pisano MM. Fluorescence-activated cell sorting of EGFP-labeled neural crest cells from murine embryonic craniofacial tissue. J Biomed Biotechnol. 2005;2005(3):232–7.
Article
PubMed
PubMed Central
Google Scholar
Martin M. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet. 2011;17(1):10–2.
Article
Google Scholar
Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 2013;14(4):R36.
Article
PubMed
PubMed Central
Google Scholar