Humphreys BD, Valerius MT, Kobayashi A, Mugford JW, Soeung S, Duffield JS, et al. Intrinsic epithelial cells repair the kidney after injury. Cell Stem Cell. 2008;2(3):284–91.
Article
CAS
PubMed
Google Scholar
Salice CJ, Rokous JS, Kane AS, Reimschuessel R. New nephron development in goldfish (Carassius auratus) kidneys following repeated gentamicin-induced nephrotoxicosis. Comp Med. 2001;51(1):56–9.
CAS
PubMed
Google Scholar
Diep CQ, Ma D, Deo RC, Holm TM, Naylor RW, Arora N, et al. Identification of adult nephron progenitors capable of kidney regeneration in zebrafish. Nature. 2011;470(7332):95–100.
Article
PubMed
PubMed Central
Google Scholar
Watanabe N, Kato M, Suzuki N, Inoue C, Fedorova S, Hashimoto H, et al. Kidney regeneration through nephron neogenesis in medaka. Develop Growth Differ. 2009;51(2):135–43.
Article
Google Scholar
Wang L, Fu C, Fan H, Du T, Dong M, Chen Y, et al. miR-34b regulates multiciliogenesis during organ formation in zebrafish. Development. 2013;140(13):2755–64.
Article
CAS
PubMed
Google Scholar
Godwin JG, Ge X, Stephan K, Jurisch A, Tullius SG, Iacomini J. Identification of a microRNA signature of renal ischemia reperfusion injury. Proc Natl Acad Sci U S A. 2010;107(32):14339–44.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zarjou A, Yang S, Abraham E, Agarwal A, Liu G. Identification of a microRNA signature in renal fibrosis: role of miR-21. Am J Physiol Renal Physiol. 2011;301(4):F793–801.
Article
CAS
PubMed
PubMed Central
Google Scholar
Chau BN, Xin C, Hartner J, Ren S, Castano AP, Linn G, et al. MicroRNA-21 promotes fibrosis of the kidney by silencing metabolic pathways. Sci Transl Med. 2012;4(121):121–18.
Article
Google Scholar
Murawala P, Tanaka EM, Currie JD. Regeneration: the ultimate example of wound healing. Semin Cell Dev Biol. 2012;23(9):954–62.
Article
CAS
PubMed
Google Scholar
Terzibasi E, Valenzano DR, Cellerino A. The short-lived fish Nothobranchius furzeri as a new model system for aging studies. Exp Gerontol. 2007;42(1–2):81–9.
Article
CAS
PubMed
Google Scholar
Hartmann N, Reichwald K, Wittig I, Drose S, Schmeisser S, Luck C, et al. Mitochondrial DNA copy number and function decrease with age in the short-lived fish Nothobranchius furzeri. Aging Cell. 2011;10(5):824–31.
Article
CAS
PubMed
Google Scholar
Harel I, Benayoun BA, Machado B, Singh PP, Hu CK, Pech MF, et al. A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate. Cell. 2015;160(5):1013–26.
Article
CAS
PubMed
Google Scholar
Zhou W, Boucher RC, Bollig F, Englert C, Hildebrandt F. Characterization of mesonephric development and regeneration using transgenic zebrafish. Am J Physiol Renal Physiol. 2010;299(5):F1040–1047.
Article
CAS
PubMed
PubMed Central
Google Scholar
Fedorova S, Miyamoto R, Harada T, Isogai S, Hashimoto H, Ozato K, et al. Renal glomerulogenesis in medaka fish, Oryzias latipes. Dev Dyn. 2008;237(9):2342–52.
Article
PubMed
Google Scholar
Kobelkowsky A. Morphology and Dissection Technique of the Kidney of the Grey Snapper Lutjanus griseus (Teleostei: Lutjanidae). Int J Morphol. 2013;31(2):553–61.
Article
Google Scholar
Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, et al. Hematopoietic gene expression profile in zebrafish kidney marrow. Proc Natl Acad Sci U S A. 2004;101(46):16240–5.
Article
PubMed
PubMed Central
Google Scholar
Augusto J, Smith B, Smith S, Robertson J, Reimschuessel R. Gentamicin-induced nephrotoxicity and nephroneogenesis in Oreochromis nilotica, a tilapian fish. Dis Aquat Org. 1996;26(1):49–58.
Article
CAS
Google Scholar
Kramer-Zucker AG, Wiessner S, Jensen AM, Drummond IA. Organization of the pronephric filtration apparatus in zebrafish requires Nephrin, Podocin and the FERM domain protein Mosaic eyes. Dev Biol. 2005;285(2):316–29.
Article
CAS
PubMed
PubMed Central
Google Scholar
McCampbell KK, Springer KN, Wingert RA. Atlas of Cellular Dynamics during Zebrafish Adult Kidney Regeneration. Stem Cells Int. 2015;2015:547636.
Article
PubMed
PubMed Central
Google Scholar
Davidson AJ. Uncharted waters: nephrogenesis and renal regeneration in fish and mammals. Pediatr Nephrol. 2011;26(9):1435–43.
Article
PubMed
Google Scholar
Wei Q, Bhatt K, He HZ, Mi QS, Haase VH, Dong Z. Targeted deletion of Dicer from proximal tubules protects against renal ischemia-reperfusion injury. J Am Soc Nephrol. 2010;21(5):756–61.
Article
CAS
PubMed
PubMed Central
Google Scholar
Saal S, Harvey SJ. MicroRNAs and the kidney: coming of age. Curr Opin Nephrol Hypertens. 2009;18(4):317–23.
Article
CAS
PubMed
Google Scholar
Ng R, Song G, Roll GR, Frandsen NM, Willenbring H. A microRNA-21 surge facilitates rapid cyclin D1 translation and cell cycle progression in mouse liver regeneration. J Clin Invest. 2012;122(3):1097–108.
Article
CAS
PubMed
PubMed Central
Google Scholar
Elmen J, Lindow M, Schutz S, Lawrence M, Petri A, Obad S, et al. LNA-mediated microRNA silencing in non-human primates. Nature. 2008;452(7189):896–9.
Article
CAS
PubMed
Google Scholar
Liu H, Huang X, Liu X, Xiao S, Zhang Y, Xiang T, et al. miR-21 Promotes Human Nucleus Pulposus Cell Proliferation through PTEN/AKT Signaling. Int J Mol Sci. 2014;15(3):4007–18.
Article
CAS
PubMed
PubMed Central
Google Scholar
Yoo EG, Lee WJ, Kim JH, Chae HW, Hyun SE, Kim DH, et al. Insulin-like growth factor-binding protein-3 mediates high glucose-induced apoptosis by increasing oxidative stress in proximal tubular epithelial cells. Endocrinology. 2011;152(8):3135–42.
Article
CAS
PubMed
Google Scholar
Yang CH, Yue J, Pfeffer SR, Fan M, Paulus E, Hosni-Ahmed A, et al. MicroRNA-21 promotes glioblastoma tumorigenesis by down-regulating insulin-like growth factor-binding protein-3 (IGFBP3). J Biol Chem. 2014;289(36):25079–87.
Article
CAS
PubMed
PubMed Central
Google Scholar
Pennanen PT, Sarvilinna NS, Toimela T, Ylikomi TJ. Inhibition of FOSL1 overexpression in antiestrogen-resistant MCF-7 cells decreases cell growth and increases vacuolization and cell death. Steroids. 2011;76(10–11):1063–8.
Article
CAS
PubMed
Google Scholar
Li Y, Yan L, Zhang W, Hu N, Chen W, Wang H, et al. MicroRNA-21 inhibits platelet-derived growth factor-induced human aortic vascular smooth muscle cell proliferation and migration through targeting activator protein-1. Am J Transl Res. 2014;6(5):507–16.
CAS
PubMed
PubMed Central
Google Scholar
Xu X, Kriegel AJ, Liu Y, Usa K, Mladinov D, Liu H, et al. Delayed ischemic preconditioning contributes to renal protection by upregulation of miR-21. Kidney Int. 2012;82(11):1167–75.
Article
CAS
PubMed
PubMed Central
Google Scholar
Tozzini ET, Dorn A, Ng'oma E, Polacik M, Blazek R, Reichwald K, et al. Parallel evolution of senescence in annual fishes in response to extrinsic mortality. BMC Evol Biol. 2013;13:77.
Article
PubMed
Google Scholar
Terzibasi Tozzini E, Savino A, Ripa R, Battistoni G, Baumgart M, Cellerino A. Regulation of microRNA expression in the neuronal stem cell niches during aging of the short-lived annual fish Nothobranchius furzeri. Front Cell Neurosci. 2014;8:51.
Article
PubMed
PubMed Central
Google Scholar
Petzold A, Reichwald K, Groth M, Taudien S, Hartmann N, Priebe S, et al. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. BMC Genomics. 2013;14:185.
Article
CAS
PubMed
PubMed Central
Google Scholar
Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009;10(3):R25.
Article
PubMed
PubMed Central
Google Scholar
Robinson MD, McCarthy DJ, Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010;26(1):139–40.
Article
CAS
PubMed
PubMed Central
Google Scholar
Anders S, Huber W. Differential expression analysis for sequence count data. Genome Biol. 2010;11(10):R106.
Article
CAS
PubMed
PubMed Central
Google Scholar
Ernst J, Bar-Joseph Z. STEM: a tool for the analysis of short time series gene expression data. BMC bioinformatics. 2006;7:191.
Article
PubMed
PubMed Central
Google Scholar
Priebe S MU: Assigment of orthologous genes by utlization of multiple databases: the orthology package in R. SCITEPRESS – Science and Technology Publications 2013. Lissabon: Bioinformatics 2013 - 4th Int. Conf. on Bioinformatics Models, Methods and Algorithms 1:pp. 105–110.
da Huang W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc. 2009;4(1):44–57.
Article
CAS
Google Scholar
Supek F, Bosnjak M, Skunca N, Smuc T. REVIGO summarizes and visualizes long lists of gene ontology terms. PLoS One. 2011;6(7):e21800.
Article
CAS
PubMed
PubMed Central
Google Scholar