- Research article
- Open Access
Cleavage of Armadillo/beta-catenin by the caspase DrICE in Drosophilaapoptotic epithelial cells
© Kessler and Müller; licensee BioMed Central Ltd. 2009
- Received: 30 October 2008
- Accepted: 20 February 2009
- Published: 20 February 2009
During apoptosis cells become profoundly restructured through concerted cleavage of cellular proteins by caspases. In epithelial tissues, apoptotic cells loose their apical/basal polarity and are extruded from the epithelium. We used the Drosophila embryo as a system to investigate the regulation of components of the zonula adherens during apoptosis. Since Armadillo/beta-catenin (Arm) is a major regulator of cadherin-mediated adhesion, we analyzed the mechanisms of Arm proteolysis in apoptosis.
We define early and late apoptotic stages and find that early in apoptosis Dα-catenin remains relatively stable, while Arm and DE-cadherin protein levels are strongly reduced. Arm is cleaved by caspases in embryo extracts and we provide evidence that the caspase-3 homolog drICE cleaves Arm in vitro and in vivo. Cleavage by drICE creates a stable protein fragment that remains associated with the plasma membrane early in apoptosis. To further understand the role of caspase-mediated cleavage of Arm, we examined potential caspase cleavage sites and found that drICE cleaves Arm at a unique DQVD motif in the N-terminal domain of the protein. Mutation of the drICE cleavage site in Arm results in a protein that is not cleaved in vitro and in vivo. Furthermore we provide evidence that cleavage of Arm plays a role in the removal of DE-cadherin from the plasma membrane during apoptosis.
This study defines the specificity of caspase cleavage of Arm in Drosophila apoptotic cells. Our data suggest that N-terminal truncation of Arm by caspases is evolutionarily conserved and thus might provide a principal mechanism involved in the disassembly of adherens junctions during apoptosis.
- Adherens Junction
- Caspase Cleavage
- Drosophila Embryo
- Embryo Extract
- Caspase Cleavage Site
Apoptosis is accompanied by a stereotypical set of morphological events almost invariable from C. elegans to man . The main features of the apoptotic cell phenotype are the condensation of the cytoplasm, breakdown of nuclear integrity, cell rounding, membrane blebbing, and in epithelial cells the loss of cell polarity and cell junctions [1–4]. These morphological changes are caused by proteolytic cleavage of key proteins by a group of aspartate-specific cystein proteases, called caspases [5–7]. Active caspases recognize and cleave their target proteins at defined tetra-peptide motifs; the cleavage site being located after an aspartate residue in the C-terminal most P1 position of a given tetra-peptide motif . Cleavage of the substrates can lead to their inactivation or activation. For example, cleavage of ICAD (Inhibitor of caspase activated DNAse) releases the active CAD endonuclease, which triggers DNA fragmentation [9, 10]. On the other hand, cleavage of Rho-associated Kinase-1 (ROCK-1) by caspase-3 leads to an activated form of the kinase that promotes membrane blebbing [2, 3]. Although many caspase substrates have been identified by proteomic approaches , the overall mechanisms and cellular consequences of target cleavage remain to be elucidated.
Early during apoptosis in epithelia, cells lose contact and are extruded by the neighbouring cells in a active process . While many cell adhesion molecules are cleaved by caspases in vitro, the relevance of such cleavage has not been addressed in vivo mostly due to the lack of a genetically tractable system. We have employed early Drosophila embryos as a model to follow the fate of the cadherin-catenin cell adhesion complex during apoptosis. The first epithelium formed in Drosophila embryogenesis is the blastoderm epithelium, a simple epithelial monolayer. A large part of the blastoderm epithelium matures gradually into the ectodermal epithelial sheet and the integrity of this epithelium depends on the activity of the cadherin-catenin system of cell adhesion molecules . DE-cadherin, Arm (beta-catenin), and Dα-catenin accumulate in adherens junctions and form a typical apical belt-like structure [14, 15]. Cadherins and catenins form stable Ca2+-dependent cell adhesion between epithelial cells and are instructive to organize the apical actin cytoskeleton [16, 17]. DE-cadherin and Arm are essential to mediate cell adhesion during the establishment of cell junctions in early development [18–22].
The aim of this study was to examine the fate of the individual components of the cadherin-catenin system during apoptosis and to determine the functional relevance of their modification by caspases. The mutation thread (th) provides a good tool to study morphological changes in apoptotic cells, because the molecular mechanism of apoptosis induction in the absence of th has been well characterized [23–27]. th encodes for the cellular caspase inhibitor DIAP1, which is essential for the survival of all cells in the early embryo. Embryos homozygous for th loss of function alleles develop normally until mid-gastrulation, however shortly after this stage all cells undergo apoptosis because of unrestrained caspase activation [24, 28, 29]. One early response of apoptotic cells in DIAP1 null mutants is a change in cell shape associated with an apparent loss in epithelial polarity and cell adhesion . We show that full length DE-cadherin and Arm are cleared from the membrane, while Dα-catenin is more stable during apoptosis. Arm is proteolytically cleaved by z-VAD-FMK sensitive proteases present in embryo extract from apoptotic cells. We present evidence that Arm is cleaved by the caspase-3 homolog drICE, and determined a DQVD motif as specific caspase cleavage site within the N-terminus of Arm. Our results show that cleavage of Arm results in a truncated C-terminal Arm cleavage product, ArmΔN that maintains its localization with Dα-catenin even after the onset of apoptotic responses. Cleavage of Arm can be prevented in apoptotic cells by a single amino acid exchange in the N-terminal DQVD motif. Expression of caspase-resistant Arm in the embryo leads to a delay of the removal of DE-cadherin from the plasma membrane of apoptotic cells. These data suggested that drICE-specific cleavage of Arm is responsible for the loss of DE-cadherin from cell junctions and thus might contribute to the degeneration of epithelial integrity during apoptosis. However we find that ArmΔN is still able to mediate cell adhesion in an arm mutant background. Therefore caspase cleavage of Arm does not render Arm non-functional suggesting that in addition to Arm cleavage other modification of the protein complex is required for the down-regulation of cadherin-dependent cell adhesion in apoptotic epithelial cells.
Arm is degraded in apoptotic cells
To examine the effects in DIAP1 mutant embryos on membrane polarity within the epithelium, we immunolocalized Bazooka (Baz), a component of the subapical region, Dα-catenin, a component of adherens junctions, and Neurotactin (Nrt), a marker of the basolateral membrane domains (Fig. 1G–R). We discriminate between two distinct developmental time points in DIAP1 mutant embryos: (1) The early stage, that lasts about 30 min after the first signs of the morphogenetic block (cephalic furrow formation + 45 min, represents developmental stage 8) and (2) The late stage, an hour after the morphogenetic block occurred (cephalic furrow formation + 60 min, corresponds to developmental stage 9). In wildtype or th109 heterozygotes, these markers label the cells circumference at different levels along the apical to basal axis (Fig. 1G, H, I, J). In DIAP1 mutants, the distribution of the marker proteins is strongly impaired. In early stages of apoptosis, Baz and Dα-catenin are still detected at the cell surface, albeit at lower levels (Fig. 1K, L, N). Nrt can no longer be detected at the cell surface, suggesting that full-length Nrt is rapidly degraded during apoptosis and thus represents an early marker for apoptotic cells in the Drosophila embryo (Fig. 1M). In late stages of apoptosis, cells in DIAP1 mutants show low levels for all three markers (Fig. 1O, P, Q, R). Only Baz immunoreactivity can still be detected in a punctate staining pattern (Fig. 1P). We conclude that components of the subapical region and the adherens junctions become redistributed and presumably degraded during apoptosis.
Arm is degraded by zVAD-sensitive proteases in extracts of apoptotic cells
Our observation on the major adherens junction proteins during apoptosis of DIAP1 mutant cells showed that Arm distribution and protein levels are strongly affected. Arm is quickly degraded at the time when caspases become activated. To test whether Arm is degraded by caspase activity in apoptotic cells, we reconstituted cleavage of Arm in vitro using an embryo extract system.
We next tested the capability of embryo extracts to cleave 35S-Arm (Fig. 3A, lanes a-c). In vitro translated 35S-Arm was stable when added to extracts from wild-type embryos, but incubation with extracts from DIAP1 mutant embryos lead to cleavage of 35S-Arm and the formation of stable fragments at apparent Mr range from 90 kDa to 70 kDa (Fig. 3A, lanes b, c). Both, the initial 35S-Arm substrate and the cleavage product were found to represent several bands, which were likely to be produced by premature termination during the in vitro translation reaction. Again, cleavage was based on zVAD-sensitive protease activity in the extract (Fig. 3A, lane a). We conclude that Arm is cleaved in vitro by a zVAD-sensitive protease, most likely reflecting caspase activity, which is present in extracts from DIAP1 mutant embryos, but not in extracts made from wildtype embryos. These data suggest that Arm is cleaved in apoptotic cells and that this cleavage might produce a stable proteolytic fragment that might persist throughout late stages of apoptosis.
Arm is cleaved by the caspase drICE at the DQVD88motif
The results from the embryo lysate system suggested that during apoptosis Arm is cleaved by caspases, because the proteolytic activity in the embryo extracts was completely inhibited by the caspase inhibitor zVAD-FMK. We therefore sought to determine which of the Drosophila caspases cleaves Arm.
It had been shown before that human beta-catenin is a target of caspase-3 mediated cleavage in cultured cells . To determine which of the Drosophila effector caspase cleaves Arm, we performed experiments with recombinant, bacterially produced caspase-3 homologues drICE and DCP1. 35S-Arm was incubated with different amounts of caspases and the stability of Arm protein was determined by SDS-PAGE and autoradiography (Fig. 3B). drICE was able to cleave Arm into a stable 90 kDa fragment while DCP1 did not cleave Arm under these conditions (Fig. 3B). Cleavage of 35S-Arm by drICE was completely blocked by addition of zVAD-FMK to the assay (Fig. 3C, a,b). We conclude that Arm is cleaved by drICE releasing a stable protein fragment, which corresponds in size to the fragment produced in the embryo lysate assay. These results suggest that the activity of the apoptotic embryo extract, which cleaves Arm, might represent endogenous drICE activity (see below). As control for the activities of the recombinant caspases, we tested their capability to cleave the known target Lamin Dmo . Both drICE and DCP1 were able to cleave 35S-Lamin Dmo, although the pattern of Lamin cleavage produced by the two caspases was distinct (Fig. 3C, c, d). As a further control, full length 35S-Lamin Dmo remained uncleaved in the presence of the caspase Decay under the same conditions (Fig. 3C).
Caspases are strictly dependent on Asp in the P1 position of target sequences and changing P1 from Asp to Ala prevents cleavage . The substrate specificities of DCP-1 and drICE are very similar, with a specificity for DXVD peptide motifs, where X has a preference for E, D, Q, T, V or A . To determine which of the five potential caspase cleavage motifs in Arm was used by drICE, we performed an in vitro mutagenesis experiment. The Arm cDNA sequence encoding putative caspase cleavage motifs was altered to create missense mutations changing Asp to Ala at P1; such mutations render these cleavage motifs non-functional. We mutated a putative cleavage site just N-terminal to the Arm repeats (ArmD170A and ArmD172A), a region that was shown to be crucial for Dα-catenin binding [34, 35]. Another potential motif C-terminal to the DE-cadherin binding region was also mutated (ArmD755A; Fig. 4A). Furthermore, we mutated the cleavage sites DQVD88 (ArmD88A) and TQFD123 (ArmD123A) in the N-terminus of Arm. The various mutated forms of Arm were radio-labelled and subjected to drICE cleavage in vitro. Mutations of the non-conserved motifs had no inhibitory effect on the cleavage and always lead to stable 90 kDa products as seen with wildtype Arm (Fig. 4B). Even mutation of the conserved TQFD123 motif did not prevent cleavage by drICE (Fig. 4B). However cleavage was completely abolished when the DQVD88 motif was altered by the mutation D88A (Fig. 4B).
To test whether Arm is indeed cleaved at DQVD88 in the embryo, we generated transgenic flies that allow conditional expression of the mutated drICE-resistant variant of Arm, ArmD88A. When analyzed by Western blotting, ArmD88A remains intact in late stage apoptotic cells (Fig. 4C). These results indicate that Arm is cleaved in the N-terminal domain during apoptosis. Furthermore, cleavage of Arm in apoptotic cells can be prevented by mutation of a single caspase consensus site in the N-terminal half of the protein.
Cleaved Arm remains associated with the cell surface in apoptotic cells
The in vitro data in combination with the over-expression data indicated that drICE-mediated removal of the N-terminal 88 amino acids leads to a stable cleavage product at a size of approximately 90 kDa. This result is in contrast to the findings described in the beginning where we found a strong decrease of Arm levels in DIAP1 mutant cells. However, since the commonly used monoclonal antibody 7A1 is directed against the N-terminus of the protein, cleavage at DQVD88 is predicted to remove the epitope for this antibody [36, 37]. Thus the observed decrease in the level of full length Arm in DIAP1 mutant cells might reflect the removal of the epitope of the anti-ArmNterm antibody rather than a decrease in the total amount of Arm protein.
Because the specificity of the anti-ArmNterm antibody might prevent detection of an N-terminally truncated Arm cleavage product, we raised a polyclonal antibody against the central domain of Arm (amino acids 172–755) referred to as anti-ArmCentral antibody (Fig. 4A). The specificity of the anti-ArmCentral antibody was determined by immunofluorescence as well as by immunoprecipitation experiments (Fig. 5). In early embryos, anti-ArmCentral immunoreactivity always co-localised with the staining obtained with anti-ArmNterm (data not shown). Furthermore, anti-ArmCentral detects full length Arm, which was immunoprecipitated either with anti-ArmCentral, anti-ArmNterm, or anti-DE-cadherin antibodies (Fig. 5A). We conclude that the anti-ArmCentral antibody recognizes full length Arm protein in Drosophila embryos.
The anti-ArmCentral antibody allowed us to determine whether a stable Arm cleavage product was generated in the embryo. We performed a Western analysis of extracts obtained from hand-selected DIAP1 mutant embryos at the late apoptotic stage. While in wildtype embryos only full-length Arm can be detected, additional forms of the protein appear in DIAP1 mutantembryos; the most prominent form with an apparent molecular weight of around 90 kDa (Fig. 5B). The 90 kDa form of Arm is stable as it persists until the late stage of apoptosis, at time points when full length Arm is no longer detectable (Fig. 5C, D, H). This experiment demonstrates the presence of a cleavage product of Arm at around 90 kDa in apoptotic cells. Strikingly, the 90 kDa fragment is not recognized by the anti ArmNterm antibody in extracts of apoptotic cells (Fig. 2H). Together these results strongly suggest that the 90 kDa fragment might indeed represent the N-terminal Arm fragment produced by drICE.
Cleavage of Arm by drICE is required for clearing of DE-cadherin from the cell membrane during apoptosis
Apoptosis represents an irreversible cellular differentiation program that results in the formation of metabolically inactive apoptotic vesicles to be eliminated by phagocytic cells. While the molecular pathways that control the execution of cell death as well as the activation and the activity of caspases have been studied in great detail, the events downstream of the execution, namely the function of individual target cleavage by caspases, are just beginning to emerge. The central question in this field is how caspase cleavage alters the activity of the proteins to orchestrate the changes in the morphology and the physiology of the dying cell. The cellular differentiation triggered by caspases might also be of interest defining the emerging role of caspases in processes unrelated to apoptosis like cell communication and differentiation [38–40].
The present study demonstrates that cell death in DIAP1 mutant Drosophila embryos represents a well-defined model system to study the specificity and function of caspase targets in apoptotic cells. DCP1 and drICE are activated in DIAP1 mutant embryos and DIAP1-dependent cell death in the early embryo requires the activity of drICE and DCP1 [24, 28, 41, 42]. The activation of caspases in DIAP1 deficient embryos depends on the Apaf-1 homolog Dark and the CARD-domain caspase DRONC [43, 44]. Dronc and Dark are required for most cell death throughout the Drosophila life cycle as only little cell death occurs in loss-of-function mutants for the respective genes [44–48]. The requirement of Dark and Dronc for DIAP1-dependent cell death indicates that cell death in DIAP1 deficient embryos is under similar control as naturally occurring cell death.
drICE and DCP-1 are the closest relatives to caspase 3, the major effector caspase in vertebrates. Although DCP1 is highly related to drICE and exhibits very similar substrate specificity, Arm is cleaved by drICE, but not DCP1 in vitro. These results suggest that DCP1 and drICE, despite all similarities described so far, have distinct substrate specificities. Consistent with this conclusion, DCP1 and drICE exhibit both overlapping and differential functions: While some cells in the embryo require both DCP1 and drICE for apoptosis, some cell types require either of these caspases . The cleavage product of Arm obtained by drICE in vitro has the same apparent molecular weight as the cleavage product detected in apoptotic cells in embryo extracts of DIAP1 mutants. Mutation of the DQVD88 motif to DQVA88 renders the protein resistant to cleavage both in vitro and in vivo, providing strong evidence that in apoptotic cells Arm is cleaved at DQVD88. In conjunction with the observations that drICE is highly expressed in the early embryo, is activated in DIAP1 mutant embryos and is required for cell death in DIAP1 mutant embryos, the results demonstrate that Arm is specifically cleaved by drICE in Drosophila embryonic apoptotic cells.
The DQVD motif is conserved in insects but it is not in vertebrate homologs of beta-catenin. Strikingly however an important caspase cleavage site has been determined in mammalian cells at a similar position (ADID93) suggesting that although the sequence has not been conserved, the position of the caspase cleavage site within the N-terminal domain of the protein has been conserved . Moreover sequence analysis of beta-catenin throughout the animal kingdom revealed predicted caspase cleavage sites at very similar positions within the N-terminal domain of beta-catenin homologs in fish, cephalochordata, annelida and nemertea (Müller, unpublished data). These observations support the idea that N-terminal truncation of beta-catenin by caspases might represent an important mechanism in morphological changes that occur during apoptosis of epithelial cells.
In cultured epithelial cells, E-cadherin is subject to extra- and intracellular degradation after induction of apoptosis . Our results suggest that removal of the N-terminal peptide does not abolish the adhesive function of Arm. This result is not unexpected as the DE-cadherin as well as Dα-catenin binding domains of Arm are not affected by drICE cleavage. Previous studies in mammalian cells are consistent with our data in that the central Arm repeats region remains unaffected by caspase cleavage. Moreover, when anoikis is induced in human breast epithelial cell lines or MDCK cells, only beta-catenin is degraded, while α-catenin and E-cadherin remained uncleaved [4, 32, 50, 51]. In this case, the truncated forms of beta-catenin were still able to bind E-cadherin and α-catenin, but still might not be able to compensate for the normal function of full-length beta-catenin in cell junctions. It is interesting to note in this context that N-terminally truncated Arm when localized in the cytoplasm is constitutively active for Wg/Wnt signalling, since it lacks phosphorylation sites for Zeste White-3 Kinase and Casein Kinase 2 [52, 53]. Since Wg signalling is required for cell survival, activated Arm in the cytoplasm might suppress apoptosis; this mechanism provides an alternative explanation for the rescue potential of ArmΔN-88 .
Does cleavage of the N-terminus of Arm by drICE contribute to the destabilisation of adherens junctions during apoptosis? To directly address this question we asked whether cleavage by drICE results in inactivation of the adhesive function of Arm by over expressing drICE resistant Arm in DIAP1 mutant embryos. Although ArmD88A expression delayed apoptosis, expression of wild-type Arm delayed the onset of apoptosis to a similar degree and thus this experiment did not reveal a specific function of Arm cleavage by caspases (Kessler and Müller, unpublished results). Therefore it is not possible to determine directly whether cleavage by drICE leads to inactivation of Arm, because over expression of a caspase substrate per se might quench caspase activity resulting in a delay of the onset of apoptosis.
One potential effect of Arm cleavage could be the release of an N-terminal fragment that might actively interfere with the stability of the cadherin-catenin complex in adherens junctions. For example it has been shown in a human tissue culture system that the N-terminal domain of beta-catenin can bind to the central region of beta-catenin and might thereby interfere with its binding to cadherins . However our biochemical analyses failed to provide evidence for the presence of such a stable N-terminal fragment in apoptotic cells. An alternative possibility is that drICE-mediated cleavage of Arm results in a reduction of its binding properties to DE-cadherin. This model would also explain the delay in the removal of DE-cadherin from the plasma membrane upon expression of the drICE-resistant form of Arm and is also consistent with a recent report showing that DE-cadherin is delocalised in DIAP1 mutant embryos . Most notably, this study also suggested that cleavage of Arm might act upstream of the down-regulation of the cadherin-catenin complex during apoptosis. The data presented here suggest that cleavage of the Arm N-terminal domain by drICE leads to a disruption of its interaction with DE-cadherin and/or with other yet to be defined components of the adherens junctions that are affecting the association of the cadherin-catenin complex in apoptotic cells. For example, deletion of the N-terminus might impair the capability of DE-cadherin to bind to the central Arm repeats as shown for human beta-catenin . It will therefore be interesting to define the nature of this potential intra-molecular interaction and to determine whether the N-terminus binds additional regulatory proteins that are involved in the adhesive properties of beta-catenin in epithelial cells.
Our work addresses the question which caspase targets trigger changes in cell adhesion and adherens junctions when polarized epithelial cells undergo apoptosis. We demonstrate that beta-catenin (Armadillo) is a direct target of the caspase drICE in Drosophila epithelial apoptotic cells. Cleavage of Arm by drICE is specific for a single caspase consensus site located in the amino-terminal domain of the protein. Mutation of this site results in a caspase-resistant form of Arm, which remains intact when expressed in apoptotic cells. Expression of caspase-resistant Arm in apoptotic cells delays disassembly of DE-cadherin from cell junctions. We therefore conclude that cleavage of Arm is an important event for dismantling of epithelial cells during apoptosis. This study also highlights that functional analyses of specific caspase target cleavage events in apoptosis can be complicated because of the complexity of proteolytic cleavages by caspases required to disassemble large protein complexes such as adherens junctions. The apoptosis model of DIAP1 deficient embryos that was used in this study provides the opportunity of a systems approach to caspase cleavage that might be able to explain the biochemical mechanisms responsible for this terminal differentiation process.
Molecular cloning and site directed mutagenesis
Molecular cloning was performed after standard protocols. ArmD88A was generated by site directed mutagenesis of the Arm cDNA in the pBluescript KS+ vector using the primer ArmD88A: 5' CAAGACCAAGTGGCT-GATATGAACCAG and its reverse complement changing aspartate 88 to alanine. The other mutated forms of Arm were generated using the primers ArmD123A (CCACCCAGTTTGCGCCCCAACAGCCG); ArmD170A (CAAGCTGCTGAACGCGGAGGATCAGGTGG), ArmD172A (TGCTGAA-CGATGAGGCGCAGGTGGTAGTAG) and ArmD755A (CTCTACCAATAGCGTCGA-TGCAGGGTCTG). Wildtype and mutated Arm cDNAs were used for in vitro caspase cleavage experiments. All mutations were confirmed by sequencing. ArmD88A was also used to generate transgenic flies carrying UAS::ArmD88A. The mutated Arm cDNA was cloned in frame to a modified pUAST vector carrying an N-terminal FLAG epitope using Not1 and Xba1 introduced with the primer pair 5' AAGGAAAAAAGC-GGCCGCCACCATGAGTTACATGCCAGCCCAGAAT3' and 5'GCTCTAGACTAACAATCGGTATCGTACCAGG3'.
Generation of the ArmCentralAntibody
The central domain of Arm containing the Arm repeats as well as a short part of the C-terminus was cloned from the Arm cDNA into the pQE30 vector with BamH1 and Pst1 after PCR using the primers 5' CGGGATCCATGAGTTACATGCCAGCCCAGA-AT 3' and 5' AACTGCAGCTAACAATCGGTATC-GTACCAGG 3'. Expression of the protein was carried out in E. coli M15 cells for 4 h at 28°C with a final concentration of 1 mM IPTG. The protein was purified with Ni2+NTA matrix under denaturing conditions in 6 M GuHCL, eluted and refolded in ice-cold buffer containing 50 mM HEPES pH 7.5, 200 mM NaCl, 1 mM DTT and 1 M NBSB-201. The eluted protein was used for immunization of a rabbit using standard protocols. Recombinant ArmCentral protein was immobilized using the amino-link plus kit (Pierce) and used for affinity-purification of ArmCentral antibodies. ArmCentral antibodies were characterized by Western blotting of embryo protein extracts and immunofluorescence staining of embryos. To verify that ArmCentral antibodies do recognize Arm from embryo protein extracts, DE-cadherin/catenin complexes were immunoprecipitated using the mouse monoclonal ArmNterm 7A1, rabbit anti ArmCentral and rat anti DE-cadherin antibodies and subsequent western blotting using 7A1 and ArmCentral antibodies. Embryo lysates were prepared through grinding embryos in ice-cold CHAPS buffer (0,2% CHAPS, 10 mM Di-thiotreitol (DTT), 100 mM HEPES, 200 mM NaCl, 20% Sucrose). Actin was used as a standard, because it represents an abundant protein in early embryos. We found that actin appears to be stable in th109 apoptotic cells.
For immunofluorescence, embryos were fixed either by the heat/methanol method  or with 4% Paraformaldehyd in PBS (in case of TUNEL staining). Primary antibodies used for immunohistology were: mouse-anti-ArmNterm 7A1 (DSHB 1:10), rat-anti-DE-cadherin (DSHB 1:20), mouse anti Neurotactin (DSHB 1:10), rat anti Dα-catenin (1:20), rabbit anti ArmCentral (1:250), mouse anti Flag M5 (Sigma, 1:1000), mouse anti En (DSHB 1:10) and rabbit anti beta-galactosidase (1:5000) or mouse anti beta-galactosidase (DSHB 1:100). TUNEL staining was performed as described before using the in situ cell death detection kit (Roche, Mannheim;).
In vitrocleavage of Arm
35S-labeled Arm protein was in vitro translated using the T7/T3 rabbit reticulocyte lysate system (Promega) using cDNAs of full-length or Arm variants, respectively. Extracts of wildtype or th109/TM3[ftz::lacZ] embryos were made under conditions previously shown to keep caspases active in these extracts . 35S-labelled Arm proteins were incubated with 30 μg of extracted protein for 4 h on 30°C. The reaction was stopped though boiling in SDS sample buffer and the sample was subjected to SDS PAGE following autoradiography. Cleavage of the Arm protein was blocked by addition of the pan-caspase inhibitor z-VAD-FMK at 20 nmol . For experiments with the recombinant proteins, His-tagged versions of drICE, DCP1 and Decay were induced in BL21pLysS bacteria and purified under native conditions as described . Plasmids were a generous gift of Soon Yi Yoo and Bruce Hay (Caltech, USA). Various amounts of caspases were used for cleavage of Arm as indicated. For all experiments in vitro translated Lamin Dmo protein was used as a positive control for active caspases in the extracts and in the purified recombinant caspase fractions. Cleavage of Lamin Dmo protein by caspases has been described before . The plasmid encoding Drosophila Lamin Dmo was a kind gift of Paul Fischer (Stony Brook, USA).
Fly work and embryo collections were performed after standard protocols. Apoptotic cells were recorded in embryos homozygous for the DIAP1 null allele th109, which carries a nonsense mutation in the N-terminus resulting in a protein lacking all known functional domains . As controls, Oregon R or w1118 embryos were examined. Transgenic lines carrying a UAS::Arm D88A transgene were obtained by standard methods. A 2nd chromosomal insertion was further used to obtain UAS::Arm D88A /UAS::Arm D88A ; th109/TM3 [ftz::lacZ]. Males of this stock were crossed to females of the recombinant th109mat15::Gal4/TM3 [ftz::lacZ] stock; this cross allows expression of the UAS transgene with onset of zygotic gene expression in the early embryo.
We are indebted to Sun Ji Yoo and Bruce Hay for providing cDNAs, proteins and protocols for caspase activation as well as helpful discussions. We thank Mariann Bienz, Paul Fisher and Andreas Wodarz for providing cDNA and antibodies. We thank Benedicte Sanson for communicating results prior to publication and Inke Näthke for critical reading of the manuscript. We thank the Bloomington Stock Center (Bloomington, USA) and the Developmental Hybridoma Bank (Iowa, USA) for fly stocks and antibodies. The work was funded by a grant from the Deutsche Forschungsgemeinschaft (MU1168/4-1;4-2;4-3) to HAJM.
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