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Table 2 GO terms enriched with the specific genes expressed in the first-, second- and third-day embryos

From: Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

Day GOID GOTerm Term P Value Term P Value Correcteda Number of genes Associated Genes Found
1 GO:0007218 neuropeptide signaling pathway 5.40E-06 1.00E-04 6 [CCAP-R, CG33639, CapaR, ETHR, FMRFaR, Lkr]
1 GO:0009415 response to water 1.50E-05 2.80E-04 3 [CapaR, Poxn, ppk28]
1 GO:0042440 pigment metabolic process 1.90E-04 3.30E-03 6 [CG1885, Cdk5alpha, Itgbn, cd, dl, yellow-d2]
1 GO:0035214 eye-antennal disc development 8.20E-03 8.20E-03 3 [Poxn, bab1, dl]
1 GO:0006582 melanin metabolic process 6.90E-04 1.10E-02 4 [Cdk5alpha, Itgbn, dl, yellow-d2]
1 GO:0001101 response to acid chemical 1.00E-03 1.50E-02 3 [CapaR, Poxn, ppk28]
1 GO:0040012 regulation of locomotion 7.90E-03 1.50E-02 3 [Hr51, Hrs, Ten-m]
1 GO:0072507 divalent inorganic cation homeostasis 5.10E-03 1.50E-02 3 [FMRFaR, Lkr, trpl]
1 GO:0010035 response to inorganic substance 4.60E-03 1.80E-02 3 [CapaR, Poxn, ppk28]
1 GO:0018958 phenol-containing compound metabolic process 1.50E-03 1.90E-02 4 [Cdk5alpha, Itgbn, dl, yellow-d2]
1 GO:0071214 cellular response to abiotic stimulus 1.30E-03 1.90E-02 4 [Arr1, CapaR, Gat, ppk28]
1 GO:0007478 leg disc morphogenesis 1.80E-03 2.20E-02 4 [Poxn, bab1, dl, trio]
1 GO:0042551 neuron maturation 4.40E-03 2.20E-02 3 [Drice, Hr51, Hrs]
1 GO:0006874 cellular calcium ion homeostasis 2.10E-03 2.30E-02 3 [FMRFaR, Lkr, trpl]
1 GO:0007455 eye-antennal disc morphogenesis 2.10E-03 2.30E-02 3 [Poxn, bab1, dl]
1 GO:0016322 neuron remodeling 4.00E-03 2.40E-02 3 [Drice, Hr51, Hrs]
1 GO:0055074 calcium ion homeostasis 2.40E-03 2.40E-02 3 [FMRFaR, Lkr, trpl]
1 GO:0072503 cellular divalent inorganic cation homeostasis 3.80E-03 2.60E-02 3 [FMRFaR, Lkr, trpl]
1 GO:0035006 melanization defense response 3.40E-03 2.70E-02 3 [Cdk5alpha, Itgbn, dl]
1 GO:0009755 hormone-mediated signaling pathway 3.20E-03 2.90E-02 3 [ETHR, Hr51, Lkr]
2 GO:0016053 organic acid biosynthetic process 7.90E-04 5.50E-03 5 [Baldspot, CG5278, Dh44-R2, Oat, b]
2 GO:0042048 olfactory behavior 2.00E-03 1.00E-02 5 [CG14509, Calr, NaCP60E, TkR99D, prt]
2 GO:0072499 photoreceptor cell axon guidance 1.70E-03 1.00E-02 3 [Nrk, gogo, jbug]
2 GO:0008033 tRNA processing 1.60E-02 1.60E-02 3 [CG10495, CG15618, CG4611]
2 GO:0046394 carboxylic acid biosynthetic process 4.50E-03 1.80E-02 4 [Baldspot, CG5278, Dh44-R2, Oat]
2 GO:0098656 anion transmembrane transport 1.50E-02 3.10E-02 3 [Best1, Indy, NaPi-T]
2 GO:0043269 regulation of ion transport 1.00E-02 3.20E-02 3 [Best1, NaCP60E, Rgk1]
3 GO:0006811 ion transport 7.00E-07 5.30E-05 24 [CG10960, CG14507, CG31028, CG31547, CG3690, CG42269, CG5002, CG5621, CG6125, CG6356, CG8249, Ca-alpha1T, Ctr1A, Gat, HisCl1, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, Zip89B, nAChRbeta1, para]
3 GO:0055080 cation homeostasis 1.30E-06 9.90E-05 11 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0098771 inorganic ion homeostasis 1.60E-06 1.20E-04 11 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0050801 ion homeostasis 2.30E-06 1.70E-04 11 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0055065 metal ion homeostasis 3.80E-06 2.70E-04 9 [Ctr1A, Dat, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0009072 aromatic amino acid family metabolic process 7.70E-06 5.50E-04 5 [CG1461, Trh, hgo, v, y]
3 GO:0072507 divalent inorganic cation homeostasis 1.20E-05 8.40E-04 7 [Dat, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0030003 cellular cation homeostasis 1.40E-05 1.00E-03 9 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0006873 cellular ion homeostasis 2.10E-05 1.40E-03 9 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0055074 calcium ion homeostasis 2.70E-05 1.80E-03 6 [Dat, Nckx30C, Nmdar1, RyR, Trpgamma, norpA]
3 GO:0098660 inorganic ion transmembrane transport 3.30E-05 2.20E-03 14 [CG31028, CG31547, CG5002, CG6125, Ca-alpha1T, Ctr1A, HisCl1, Mco1, Nckx30C, RyR, Trpgamma, Zip42C.1, Zip89B, para]
3 GO:0055082 cellular chemical homeostasis 4.90E-05 3.20E-03 9 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0006875 cellular metal ion homeostasis 5.70E-05 3.60E-03 7 [Ctr1A, Dat, Mco1, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0000041 transition metal ion transport 1.20E-04 7.80E-03 5 [Ctr1A, Mco1, Trpgamma, Zip42C.1, Zip89B]
3 GO:1901565 organonitrogen compound catabolic process 1.30E-04 8.30E-03 9 [CG5418, CG8129, CG9380, Dat, GLS, PGRP-LB, hgo, v, verm]
3 GO:0048878 chemical homeostasis 1.40E-04 8.90E-03 11 [CG5002, CG6125, Ctr1A, Dat, Mco1, Nckx30C, Nmdar1, RyR, Trpgamma, Zip42C.1, norpA]
3 GO:0019725 cellular homeostasis 1.90E-04 1.10E-02 11 [CG5002, CG6125, CG6888, Ctr1A, Dat, Mco1, Nckx30C, RyR, Trpgamma, norpA, tn]
3 GO:0006874 cellular calcium ion homeostasis 2.50E-04 1.50E-02 5 [Dat, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0042430 indole-containing compound metabolic process 3.30E-04 1.90E-02 3 [Dat, Trh, v]
3 GO:0044550 secondary metabolite biosynthetic process 3.80E-04 2.10E-02 5 [Elo68alpha, v, y, yellow-c, yellow-e2]
3 GO:0046189 phenol-containing compound biosynthetic process 5.10E-04 2.80E-02 4 [Trh, y, yellow-c, yellow-e2]
3 GO:1901606 alpha-amino acid catabolic process 5.10E-04 2.80E-02 4 [CG8129, GLS, hgo, v]
3 GO:0070838 divalent metal ion transport 6.40E-04 3.50E-02 6 [Ca-alpha1T, Nckx30C, RyR, Trpgamma, Zip42C.1, Zip89B]
3 GO:0072511 divalent inorganic cation transport 6.40E-04 3.50E-02 6 [Ca-alpha1T, Nckx30C, RyR, Trpgamma, Zip42C.1, Zip89B]
3 GO:0072503 cellular divalent inorganic cation homeostasis 6.60E-04 3.60E-02 5 [Dat, Nckx30C, RyR, Trpgamma, norpA]
3 GO:0006820 anion transport 7.90E-04 4.20E-02 8 [CG14507, CG31547, CG3690, CG5002, CG6125, CG6356, Gat, HisCl1]
3 GO:0015711 organic anion transport 8.30E-04 4.30E-02 6 [CG14507, CG3690, CG5002, CG6125, CG6356, Gat]
  1. aGO Term P-values were corrected with the method of Bonferroni step down