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Table 1 Identification of putative genes from SSH of tester cDNA from molting 5th instar larvae and driver cDNA from feeding 6th instar larvae

From: Identification of genes differentially expressed during larval molting and metamorphosis of Helicoverpa armigera

Classification

No

Tissue Sources

Similar genes in GenBank

E-value

Functions of the genes

Ribosome proteins

1

head midgut epidermis

ribosomal protein L27 [S. frugiperda]

1e-55

participates in both 50 S subunit assembly and the peptidyl transferase reaction

 

2

head

ribosomal protein S7 [S.frugiperda]

7e-23

initiating assembly of the head of the 30S subunit

 

3

fat body midgut

ribosomal protein S2 [B. mori]

2e-40

maintaining balance between the small and large ribosomal subunits

 

4

midgut

ribosomal protein L17/23 [Apis mellifera]

8e-17

regulator of the p53-MDM2 feedback regulation

 

5

midgut

ribosomal protein L38 [Plutella xylostella]

2e-17

protein of 60 S ribosomal subunit

 

6

haemocyte

ribosomal protein S24 [B. mori]

1e-21

protein of 40 S ribosomal subunit

 

7

head

ribosomal protein L22 [S. frugiperda]

2e-29

large ribosomal subunit

 

8

midgut

ribosomal protein L13 [S. frugiperda]

3e-43

60 S ribosomal subunit protein

Hydrolases

9

fat body

molting fluid carboxypeptidase A [B. mori]-1

3e-31

pupal ecdysis, recycling of the amino acids

 

10

haemocyte

cathepsin L like protease [Glossina morsitans morsitans]

1e-25

larval molting and cuticle and eggshell remodeling

 

11

midgut

trypsinogen Y precursor [Gadus morhua]

2e-06

hydrolase

 

12

epidermis

molting fluid carboxypeptidase A [B. mori]-2

1e-54

molting-related

 

13

epidermis

plasminogen activator, tissue [Mus musculus]

7e-07

hydrolase

 

14

midgut

lipase-1 [B. mandarina]

2e-23

lipid digestion

 

15

fatbody

chitinase [H. armigera] (BLAST by nucleotide acids)

0.42

hydrolase

Immune-related Genes

16

haemocyte

lipopolysaccharide binding protein [B. mori]

6e-26

immune

 

17

fat body

immune reactive putative protease inhibitor PrInh6 [Glossinamorsitans morsitans]

2e-09

immune

Regulators

18

fat body haemocyte

CHK1 checkpoint homolog [Xenopus tropicalis]

2e-07

DNA damage and replication checkpoints

 

19

midgut

CG13323-PA [D. melanogaster] (similar to hmg176)

6e-05

-

 

20

epidermis

thymosin beta homologue [Ciona intestinalis]

0.55

actin-remodeling, wound healing, angiogenesis

enzyme

21

head

Na-K-ATPase [Anopheles gambiae]

2e-09

enzyme

Others

22

midgut

TNF receptor homolog 3 [Rattus norvegicus]

3

cellular proliferation, differentiation and programmed cell death

 

23

epidermis

Titin-like protein [B. mori]

8e-15

roles in chromosomes and muscles

 

24

midgut

Acyla-CoA binding protein [B. mori]

4e-06

intracellular acyl-CoA transporters

 

25

fat body

hypothetical protein Llacc01000286 [Lactococcus lactis subsp.cremoris SK11]

1e-24

-

 

26

head

CG32972-PB, isoform B [D.melanogaster]

0.011

-

 

27

fat body

16S rRNA [S. frugiperda] (BLAST by nucleotide acids)

7e-17

-

Unknown ESTs

28–35

epidermis

Unknown proteins

 

-