Skip to main content

Table 4 Q-rtPCR validation of 13 genes from the RAG list.

From: Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling

Rank in array

Gene name

Lens (L/S)

CLT (R/S)

  

qPCR

qPCR

array

3

Tcf7

0.6

5.7

7.8

10

Crop

0.7

1.4

3.3

11

Nipsnap1 (sim)

0.1

176.3

8.5

12

Taf1b

1.0

8.0

10.2

15

Mybph

0.0

0.2

52.1

31

Pdik1l-b

1.1

10.3

12.3

38

Gnai2

5.5

56.1

6.3

41

Tcf4

0.0

4.4

4.3

45

Mmp-11

1.8

100.0

2.4

56

Creld1

0.0

1.6

5.2

71

Amph

24.2

74.6

2.9

479

Mmp14

0.1

3.4

2.3

1391

Lmo4

4.11

2.2

1.4

  1. Bold numbers indicate upregulation of more than 1.5 fold, numbers in italics indicate down regulation and normal font indicates no significant change. L/S shows the relative (fold higher) expression in lens when compared to sham operated corneas. Likewise R/S shows relative expression in corneas undergoing CLT when compared to sham operated control corneas.