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Table 1 Top 10 statistically over represented GO categories in the CRY* list

From: Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling

GMRG_Term

TC numbers

p

Description

 

total

subset

  

GO:0000065/0000743

16

6

0.001

nuclear migration along microtubule/during conjugation with cellular fusion

GO:0007275

243

32

0.003

multicellular organismal development

GO:0046785

10

4

0.006

microtubule polymerization

GO:0001737

2

2

0.006

establishment of wing hair orientation

GO:0006221

2

2

0.006

pyrimidine nucleotide biosynthetic process

GO:0007464

2

2

0.006

R3/R4 cell fate commitment

GO:0043010

2

2

0.006

eye development (sensu Vertebrata)

GO:0006364

29

7

0.006

rRNA processing

GO:0007601

87

14

0.008

visual perception

GO:0007222

12

4

0.012

frizzled signaling pathway

  1. TC numbers are tentative consensus numbers and each one represents a group of ESTs for one gene, as well as providing a way to link to gene ontology. Total TC therefore shows the number of genes on the Xenopus GeneChip which are linked to a particular ontology, and subset TC shows how many of these were found in the CRY* list