SEL1L deficiency impairs growth and differentiation of pancreatic epithelial cells

Background The vertebrate pancreas contains islet, acinar and ductal cells. These cells derive from a transient pool of multipotent pancreatic progenitors during embryonic development. Insight into the genetic determinants regulating pancreatic organogenesis will help the development of cell-based therapies for the treatment of diabetes mellitus. Suppressor enhancer lin12/Notch 1 like (Sel1l) encodes a cytoplasmic protein that is highly expressed in the developing mouse pancreas. However, the morphological and molecular events regulated by Sel1l remain elusive. Results We have characterized the pancreatic phenotype of mice carrying a gene trap mutation in Sel1l. We show that Sel1l expression in the developing pancreas coincides with differentiation of the endocrine and exocrine lineages. Mice homozygous for the gene trap mutation die prenatally and display an impaired pancreatic epithelial morphology and cell differentiation. The pancreatic epithelial cells of Sel1l mutant embryos are confined to the progenitor cell state throughout the secondary transition. Pharmacological inhibition of Notch signaling partially rescues the pancreatic phenotype of Sel1l mutant embryos. Conclusions Together, these data suggest that Sel1l is essential for the growth and differentiation of endoderm-derived pancreatic epithelial cells during mouse embryonic development.


Background
The multiple cell types that make up the adult pancreas, including endocrine, exocrine and ductal cells, derive from a common pool of pancreatic progenitors. Pancreatic development in mice begins at embryonic day 9.5 (E9.5) with the formation of two epithelial buds on the dorsal and ventral side of the primitive gut endoderm [1]. Epithelial cells within the pancreatic buds proliferate rapidly and branch out during later embryonic days to form a complex tubular network comprised of undifferentiated multipotent progenitor cells [2,3]. Starting at E13.5, the expanded pancreatic epithelial cells undergo an asynchronized wave of differentiation to give rise to all the differentiated cell types of the adult pancreas, including acinar cells that produce hydrolytic digestive enzymes and islet cells that secrete endocrine hormones [4,5]. Pancreatic morphogenesis depends on a complex and yet incompletely characterized network of transcription factors. Significant efforts have been made in the past few years to understand the role of several important transcription factors, including Pdx1 [6,7], Ptf1a [8,9], Sox9 [10,11]9, Ngn3 [12,13], NeuroD1 [14,15], Pax4 [16], Pax6 [17], Nkx2.2 [18], Nkx6.1 [19], Arx [20], Isl1 [21] and Insm1 [22]. It is generally accepted that these transcription factors coordinate pancreatic morphogenesis by functioning in concert to restrict the developmental potentials of the pancreatic progenitors in a spatial and stage-specific manner [23].
Several previous studies have underscored the importance of Notch-mediated signaling in regulating pancreatic cell proliferation and cell fate decisions through control of Ngn3 gene expression. During pancreatic development, Ngn3 is transiently expressed in a subset of the pancreatic epithelial cells. NGN3 deficiency completely abolishes formation of all the endocrine cell subtypes, suggesting Ngn3 functions as a master switch for the endocrine lineage in the pancreas. Mutations in genes encoding Notch signaling pathway components, such as DLL1 (ligand), RBP-Jk (the intracellular mediator), or HES-1 (the effector) causes expansion of Ngn3 expression in pancreatic cells and, as a result, accelerated differentiation of endocrine cells at the expense of acinar and ductal cells [13,24,25]. Conversely, over or persistent expression of the Notch intracellular domain (NICD), a constitutively active form of Notch receptors, or the Notch effector gene Hes1 results in diminished expression of Ngn3 and attenuated differentiation of endocrine cells [26][27][28]. These studies suggest that during pancreatic development Notch signaling controls the endocrine and exocrine cell fate decisions of pancreatic epithelial cells by directly regulating Ngn3 expression. Recent studies have also indicated the importance of Notch signaling in control of exocrine cell differentiation. Ectopic expression of activated NOTCH-1 prevents or significantly delays differentiation of acinar cells [26,27].
While the role of Notch signaling in control of pancreatic cell proliferation and cell fate decisions is clearly recognized, the molecular mechanisms necessary for proper control of Notch signaling during vertebrate pancreatic development are poorly understood. Genetic and biochemical studies in invertebrates suggest that regulation of Notch signaling occurs at various levels and through multiple mechanisms [29][30][31]. These include stochastic and/or developmental expression of the Notch receptors and their ligands [32][33][34], selective receptor-ligand interactions [35,36], intracellular protein trafficking [37] and stability of NICD [38]. Suppressor enhancer lin12 1 like (Sel1l) encodes a cytoplasmic protein that is highly conserved throughout the vertebrate kingdom [39]. RNA in situ hybridization and immunohistological analysis revealed that Sel1l is highly expressed in both the embryonic and adult pancreas [40][41][42]. The human Sel1l gene is located in a chromosome region that is in close proximity to a type 1 diabetes high risk locus, IDDM-11 (insulin-dependent diabetes mellitus locus 11), prompting the speculation that mutations in Sel1l may be associated with the pathogenesis of type 1 diabetes [43]. Sel-1, the C. elegans ortholog of Sel1l, was first identified in a genetic screen for mutations that suppress lin-12/Notch activity [44]. Subsequent biochemical studies demonstrated that Sel-1 negatively regulates lin-12/Notch activity by controlling lin-12/Notch turn-over [45,46]. Based on these findings, it has been suggested that Sel1l may also function as a negative regulator for Notch signaling [47]. Recent biochemical and molecular studies in vitro revealed that Sel1l is also required for maintaining homeostasis of the endoplasmic reticulum (ER). SEL1L nucleates an ER membrane protein complex that is required for dislocation of unfolded or misfolded proteins from the ER lumen into the cytosol for degradation [48,49].
In an attempt to decipher the developmental and physiological roles of Sel1l, we have generated and characterized mice carrying a gene trap mutation in the Sel1l gene. We report here that Sel1l expression during pancreas development coincides with differentiation of pancreatic epithelial cells into both the endocrine and exocrine lineages. Homozygous Sel1l mutant embryos exhibit an impaired pancreatic epithelial growth and branching morphology. Pharmacological inhibition of Notch signaling rescues the pancreatic phenotype of Sel1l-deficient embryos. These data are consistent with the notion that Sel1l functions as a negative regulator for Notch signaling during pancreatic organogenesis [47].

Sel1l expression during mouse pancreatic development
We generated mice carrying a gene-trap insertion in the Sel1l gene. The gene trap cassette, located in intron 14, contains a β-galactosidase-neomycin (βgeo) fusion reporter gene. To determine the spatiotemporal expression pattern of Sel1l in the developing mouse pancreas, we performed immunohistological analysis of pancreatic sections from Sel1l +/bgeo embryos using antibodies against β-galactosidase (βgal) and several pancreatic proteins, including SOX9 and PDX1 (progenitor markers), insulin and glucagon (endocrine lineage markers) and amylase (exocrine lineage marker). βgal expression was first detected at E12.5 in a small number of cells located within the core of SOX9-expressing pancreatic epithelium ( Fig. 1A-B). The βgal + cells at E12.5 express either glucagon (Fig. 1C) or insulin (Fig. 1D), indicating that they were early endocrine cells. βgal expression expands significantly between E12.5 and E14.5. At E14.5, differential βgal expression was detected in the PDX1 + cells throughout the pancreatic epithelium (Fig. 1E). Epithelial cells with markedly lower βgal expression correspond to a subset of PDX1 + cells that express SOX9 (Fig. 1F). At E15.5, high βgal expression was detected in the core of the differentiating pancreas ( Fig. 1G-H, asterisks). These βgal + cells were positive either for glucagon or insulin (arrows in Fig. 1I and 1J, respectively). At birth, βgal expression was detected in both islet and acinar cells (Fig. 1K-L, asterisk and arrow, respectively). Taken together, these expression data indicate that Sel1l is selectively expressed in the differentiating or differentiated pancreatic epithelial cells.

SEL1L deficiency results in defective pancreatic epithelial growth and branching morphogenesis
The gene trap in Sel1l contains a strong splicing acceptor signal that efficiently blocks splicing between exon 14 and 15, resulting in a truncated Sel1l transcript. Homozygous gene trap mice (Sel1l bge/bgeo ) exhibit systemic endoplasmic reticulum stress and die before E13.5 to E15.5 (Additional file 1). To determine if Sel1l is required for pancreatic epithelial growth, we performed morphometrical analysis of the developing pancreas of viable Sel1l bgeo/bgeo embryos. At E11.5, the dorsal and ventral pancreatic buds in Sel1l bgeo/bgeo embryos appeared to be closely linked (Fig. 2B), as compared to those in wild-type embryos ( Fig. 2A). There was no significant difference in the pancreatic epithelial size between wild-type and Sel1l bgeo/bgeo embryos (Fig. 2E). At E13.5, the dorsal pancreatic bud of Sel1l bgeo/bgeo embryos ( Fig. 2C) was clearly smaller than that of wildtype embryos (Fig. 2F). In addition, while wild-type pancreatic epithelium displayed a well-branched structure, mutant pancreatic epithelium appeared to be a simple tube of epithelial cells. TUNEL assays revealed no significant increase of apoptosis in the developing pancreas of Sel1l mutant embryos (data not shown). Immunostaining using anti-PCNA (a cell proliferation indicator) antibody indicated that the pancreatic epithelium of Sel1l mutant embryos had a significantly lower . At this stage, there is no co-expression of βGal and SOX9 (B); however, βGal is co-expressed with either glucagon (C) or insulin (D). (E-F) βGal expression at E14.5. βGal is differentially expressed in the PDX1 + cells (E). While high βGal signal was detected in the epithelial branches (arrows), no or very low Gal signal was detected in the core "duct-like" epithelium (arrowhead). These core epithelial cells correspond to the subset of PDX + cells that express SOX9 (F). (G-J) βGal expression at E15.5. βGal expression increases markedly in the core pancreatic epithelium (G and H, asterisks). βGal co-localizes with either glucagon (I, arrows) or insulin (J, arrows). (K-L) βGal expression at postnatal day 1. βGal is expressed in both islet and acinar tissues (K, asterisk and arrow, respectively). βGal co-localizes with PDX1 in the islet tissue (L). Scale bars: (A, G, I and J) 50 μm; (B-F, K-L) 100 μm. rate of cell proliferation than wild-type pancreatic epithelium (Fig. 2G). Together, these results indicate that Sel1l, while dispensable for pancreatic epithelial induction, is essential for the subsequent growth and branching morphogenesis of the pancreatic epithelial cells.

SEL1L deficiency inhibits differentiation of acinar cells and significantly attenuates differentiation of endocrine cells
We next investigated the role of Sel1l in pancreatic epithelial cell differentiation. Since the first wave of cell differentiation occurs before E12.5 and the cells generated are mostly α-cells, we analyzed glucagon expression The dorsal pancreatic bud of Sel1l bgeo/bgeo embryos exhibits a markedly reduced epithelial size and an impaired branching morphology. (E-F) Statistical analyses of estimated pancreatic epithelial sizes of wild-type and Sel1l bgeo/bgeo embryos at E11.5 (E) and E13.5 (F). Data were from three sets of wild-type and Sel1l bgeo/bgeo embryos. No significant difference in the epithelial sizes of wild-type and Sel1l-deficient pancreas at E11.5 was detected (E). At E13.5, the pancreatic epithelium of Sel1l-deficient embryos was significantly smaller (F). Scale bar: 100 μm. in E11.5 Sel1l bgeo/bgeo embryos. As shown in Fig. 3A-B and 3G, comparable numbers of glucagon + cells were observed in wild-type and Sel1l bgeo/bgeo embryos. Sel1l is thus unlikely to be required for the generation of early endocrine cells during the first transition (E9.5 to E12.5).
While the majority of Sel1l bgeo/bgeo embryos (95%) die before the initiation of the major wave of cell differentiation in the developing pancreas (E13.5), about 5% of these embryos are viable at E15.5. To determine if Sel1l is required for differentiation of pancreatic epithelial cells during the secondary transition (E13.5 to E15.5), we analyzed the expression of three pancreatic lineage markers: insulin (β-cells), glucagon (α-cells) and amylase (acinar cells) in these embryos. Significant numbers of glucagon + and insulin + cells were detected in wild-type embryos at E15.5 ( Fig. 3C and 3E). In contrast, the numbers of glucagon + and insulin + cells were significantly reduced in Sel1l bgeo/bgeo embryos ( Fig. 3D and 3F, 3H and 3I). Abundant amylase + cells are present in wild-type embryos at E15.5 (Fig. 4E). In contrast, no amylase + cells are detectable in Sel1l bgeo/bgeo embryos (Fig. 4F). Disruption of Sel1l function thus results in an impaired differentiation of both acinar and islet cells.

SEL1L-deficient pancreatic epithelium exhibits inhibited growth and differentiation ex vivo
To ensure that the growth and differentiation defects observed in Sel1l bgeo/bgeo embryos were not due to the effect of global embryonic growth retardation of these embryos, we studied the pancreatic phenotype of Sel1l bgeo/ bgeo embryos using an organ culture system. The dorsal pancreatic bud of wild-type and Sel1l bgeo/bgeo embryos were isolated at E11.5 and cultured for 8 days. The cultured pancreatic explants were then analyzed by immunofluorescence using antibodies against PDX1 and insulin. In general, Sel1l-deficient pancreatic epithelium grows poorly (Suppl. Fig. 2B and 2D) with about half of the cultured mutant epithelia failing to form branched epithelial structures. This is in sharp contrast to the growth behavior of wild-type pancreatic epithelia, which form a branched epithelial structure (Additional file 2). The number of insulin + cells was significantly decreased in Sel1l-deficient pancreatic explants (Fig. 4B), as compared to that in wildtype control explants (Fig. 4A). Amylase + cells were detected in cultured Sel1l-deficient explants (Fig. 4D), although the number of amylase + cells was significantly lower compared to that in wild-type control explants (Fig.  4C). Thus, the pancreatic epithelium of Sel1l bgeo/bgeo embryos displays impaired growth, branching morphogenesis and lineage differentiation ex vivo. These findings confirm that the pancreatic defects observed in Sel1l-deficient embryos at E15.5 are not due to the global growth retardation.
Pancreatic progenitor cells in SEL1L-deficient embryos at E15.5 are confined to a pluripotent progenitor state To gain insight into the molecular basis underlying the pancreatic defects in Sel1l bgeo/bgeo embryos, we first analyzed the expression of several transcription factors important for pancreatic epithelial growth and lineage formation. Immunostaining was carried out to assess the expression of Sox9, Pdx1 and Ptf1a in E15.5 Sel1l bgeo/bgeo embryos. PDX1 expression was uniformly detected in the pancreatic epithelial cells of Sel1l bgeo/bgeo embryos (Fig. 5B). This is in sharp contrast to wild-type embryos where PDX1 expression was differentially expressed in the pancreatic epithelial cells, with high expression in a subset of the core epithelial cells and low expression in the peripheral epithelial cells (Fig. 5A, white arrow and red arrowheads, respectively). No PTF1a expression was detected in the pancreatic epithelium of Sel1l bgeo/bgeo embryos (Fig. 5B), whereas clear co-expression of PTF1a and PDX1 was detected in the proacini in the periphery of the pancreatic epithelial buds (Fig. 5A, white arrows). SOX9 was detected in approximately 20% of the PDX1 + cells in wild-type embryos (Fig. 5C, red arrows). In contrast, SOX9 expression was observed in more than 70% of the PDX1 + cells in Sel1l bgeo/bgeo embryos (Fig. 5D, asterisk). These findings are consistent with the notion that the pancreatic epithelial cells in Sel1l bgeo/bgeo embryos at E15.5 are restricted the pancreatic progenitor state.
Pharmacological inhibition of Notch signaling rescues endocrine lineage formation in Sel1l bgeo/bgeo embryos Sel1l was thought to be a negative regulator for Notch signaling [47]. Indeed, the pancreatic phenotype in Sel1l bgeo/ bgeo embryos shows remarkable similarity to that of mouse or zebrafish embryos over-expressing Notch intracellular domain, the constitutively active form of Notch receptors [26,28,50]. We speculated that the impaired pancreatic epithelial growth and differentiation in Sel1l-deficient embryos may be due to an increased Notch signaling activity. To test this possibility, we used the γ-secretase inhibitor, DAPT (Difluorophenacetyl-al-alanyl-S-phenylglycine-t-butyl ester), to suppress Notch signaling in pancreatic explants culture. The dorsal pancreatic bud of wild-type and Sel1l bgeo/bgeo embryos was isolated at E11.5 and cultured for 8 days in the absence or presence of DAPT. At a concentration of 10 μM, DAPT did not exhibit detectable effects on the growth, branching morphology and endocrine cell differentiation of wild-type pancreatic epithelium (Fig. 6A-B and 6E). At the same concentration, however, DAPT caused a significant expansion of the SEL1L-deficient pancreatic epithelium (Fig.  6C-D). Importantly, DAPT treatment resulted in a marked increase in the number of insulin + cells (Fig. 6D and 6F). These observations indicate that pharmacological E15.5, the number of glucagon + cells was reduced in Sel1l bgeo/bgeo embryos as compared to wild-type control. (E-F) No amylase + cells were detected and the number of insulin + cells was significantly reduced in Sel1l bgeo/bgeo embryos. (G-I) Statistical analyses of the numbers of glucagon + and insulin + cells in wild-type and Sel1l bgeo/bgeo embryos. Data were from three wild-type and three Sel1l bgeo/bgeo embryos. At E11.5, no significant difference in the number of glucagon + cells in wild-type and Sel1l bgeo/bgeo embryos was detected (G). The number of glucagon + and insulin + cells was markedly lower in Sel1l bgeo/bgeo embryos than in wild-type control embryos (H and I, respectively). Scale bar: 100 μm.
inhibition of Notch signaling rescues, at least partially, the pancreatic epithelial growth and endocrine differentiation defects of Sel1l bgeo/bgeo embryos.

Discussion
The genetic determinants underlying vertebrate pancreatic development are not completely understood. In the present study, we report that Sel1l expression in the developing mouse pancreas coincides with differentiation of the endocrine and exocrine lineages during the second transition. Embryos homozygous for a gene trap insertion in Sel1l display impaired pancreatic epithelial growth and differentiation. Pharmacological inhibition of Notch signaling partially rescues the pancreatic phenotype of SEL1L-deficient embryos. Together, these data provide evidence that Sel1l is required for growth and differentiation of the mammalian pancreatic epithelial cells. The underlying mechanism may be that Sel1l functions as a negative regulator for the Notch signaling pathway by facilitating degradation of the Notch intracellular domain.
Donoviel et. al. previously reported that the mouse Sel1l gene is highly transcribed in the acini of the developing pancreas at E14.5 and E17.5 [41]. We show, by immunohistological analysis of the β-galactosidase reporter in Sel1l, that Sel1l is also highly expressed in early glucagon + and insulin + cells ( Fig. 1C and 1D, respectively) generated during the first transition period Figure 4 Sel1l-deficient pancreatic epithelium exhibits impaired growth, branching morphology and differentiation ex vivo. Dorsal pancreatic buds of wild-type and Sel1l bgeo/bgeo embryos were isolated at E11.5 and cultured as described in Materials and Methods. The genotypes of the pancreatic explants are indicated as "+/+" and "-/-", respectively. Cultured pancreatic explants were immunostained using the indicated antibodies. Sel1l-deficient pancreatic epithelium grows poorly and displays impaired branching morphology (B and D), as compared to wild-type control explants (A and C). The number of insulin+ cells in mutant pancreatic epithelia were markedly reduced (B, arrows), as compared to the wild-type controls (A, arrows). Amylase expression was detected in Sel1l-deficient pancreatic epithelium (D, arrows), but the expression is significantly lower than that in wild-type epithelium (C, arrows). Scale bar: 100 μm. of pancreatic development [5,51,52]. Consistent with the Sel1l mRNA expression pattern reported by Donoviel et. al., we reveal that at E14.5 Sel1l is broadly expressed in the PDX1 + pancreatic epithelia (Fig. 1E). Interestingly, significantly lower Sel1l expression is observed in the undifferentiated pancreatic epithelial cells (Fig. 1F) that express SOX9 [10,11]. Our findings therefore indicate that Sel1l expression is enhanced in the committed pancreatic epithelial cells or differentiated endocrine and exocrine cells.
The selective expression of Sel1l in differentiating or differentiated pancreatic epithelial cells is highly suggestive of a role for Sel1l in promoting lineage differentiation during the secondary transition. To define the role of Sel1l in pancreatic development, we characterized the pancreatic phenotype of embryos homozygous for a gene trap insertion in Sel1l. We show that wild-type and Sel1ldeficient embryos have a comparable pancreatic epithelial size at E11.5 ( Fig. 2A-B and 2E), suggesting that Sel1l function is dispensable for the induction and early growth of pancreatic epithelial cells. At E13.5, however, Sel1l-deficient pancreatic epithelia are significantly smaller and display an impaired branching morphology (Fig.  2C-D and 2F). Importantly, Sel1l-deficient pancreatic epithelia at E15.5 completely lack amylase + cells (Fig. 3F) and have significantly reduced numbers of glucagon + and insulin + cells ( Fig. 3D and 3F, respectively). Also, by analyzing the phenotype of cultured Sel1l-deficient dorsal pancreatic epithelia, we confirmed that the pancreatic defects in Sel1l-deficient embryos are not due to the effect of global growth retardation of the Sel1l-deficient embryos (Fig. 4A-D). Together, these data strongly suggest that Sel1l plays an important role in mouse pancreatic organogenesis by facilitating differentiation of the endocrine and exocrine lineages of the pancreas.
The C. elegans ortholog of the mammalian Sel1l gene, Sel-1, was originally identified by genetic screening as a negative regulator for lin-12/Notch signaling [44,53]. Biochemical studies have shown that Sel-1 regulates lin-12/ Notch receptor turnover [45,46]. Whether or not Sel1l has similar functions in the mammalian system remains unclear [54]. In this study, we provide two lines of evidence that suggest Sel1l also functions as a negative regulator for Notch signaling, at least in the developing mouse pancreas. First, the observed pancreatic phenotype in Sel1l mutant embryos show remarkable similarity to the pancreatic phenotype of transgenic vertebrate embryos over-expressing the Notch intracellular domain, the constitutively active form of Notch [26,28,50]. Second, we show that treatment of cultured Sel1l-deficient pancreatic epithelium with DAPT, a potent Notch signaling inhibitor, partially rescues the growth and differentiation defects of Sel1l-deficient pancreatic epithelium (Fig. 6D and 6F).
How does SEL1L negatively control Notch signaling in the developing mammalian pancreas is the focus of our current investigation. Genetic and biochemical evidences from other organisms such as Drsophila and C. elegans suggest that Notch signaling is regulated at multiple levels and through multiple mechanisms, including stochastical gene expression [34], selective ligand-receptor interactions [35], intracellular trafficking [37], and stability of NICD, the active form of Notch receptors [30]. Given the previous finding that mammalian NICD are ubiquitinated and degraded through both the proteasomal and lysosomal systems [55,56], it is conceivable that Sel1l may be directly or indirectly involved in control of NICD degradation. In this regard, it is noteworthy to mention that recent biochemical data from our laboratory indicate that NICD has significantly higher protein stability in Sel1l-deficient MEF cells (data not shown). Further proof of this hypothesis will require a detailed biochemical analysis of SEL1L and Notch interactions.
Biochemical evidences from other laboratories have also underscored the importance of Sel1l in maintaining ER homeostasis. SEL1L interacts with the E3 ubiquitin ligase HRD1 to facilitate the dislocation of unfolded or misfolded proteins from the ER lumen into the cytosol for degradation [48,49,[57][58][59][60]. Consistent with this, we have recently shown that homozygous Sel1l mutant mice develop systemic ER stress. The impact of ER stress on pancreatic epithelial proliferation and differentiation remains undefined from the current study. However, several hypothetical roles of ER stress in pancreatic organ development and growth can be proposed. First, ER stress affects global gene expression. Upon ER stress, translation is generally down to reduce production of ER client proteins. Concomitantly, transcription of genes encoding ER chaperones and ER-associated degradation (ERAD) machinery is increased. Second, ER stress blocks or reduces protein secretion by mammalian cells. This will directly affect cell signaling and cell functions. Finally, prolonged ER stress activates the signaling pathways leading to apoptosis.

Conclusions
We report that during mouse pancreatic development, Sel1l is preferentially expressed in the differentiating or differentiated pancreatic epithelial cells. Disruption of Sel1l function results in impaired endocrine lineage formation and delayed exocrine lineage differentiation. Pharmacological suppression of Notch signaling in cultured pancreatic explants partially rescues the endocrine cell differentiation defect. Our data suggest that Sel1l may regulate pancreatic epithelial growth and differentiation by suppressing Notch-mediated signaling.

Sel1l gene trap mice
The chimeric founder mouse used to generate Sel1l gene trap mice was generated by microinjection of a commercially available mouse embryonic stem (ES) cell clone, CA0017, into C57/BL6 blastocysts. This ES cell clone contains a gene trap insertion in the 14 th intron of the Sel1l gene. All mice or mouse embryos were genotyped by PCR analysis of tail or toe genomic DNA using the following PCR primers: F-Sel1l: 5'-TGGGACAGAGCGGGCTTGGAAT-3'; R-Sel1l: 5'-CACCAGGAGTCAAAGGCATCACTG-3'; R-βGeo: 5'ATTCAGGCTGCGCAACTGTTGGG-3'.
All animal experiments were performed in accordance with the Cornell Animal Care and Use Guidelines.

Pancreatic morphometry and cell counting
Quantitative morphometry of the developing pancreas and cell counting were performed essentially as described [11]. Briefly, pancreata of age-matched wild-type and Sel1l bgeo/bgeo embryos were sectioned through and every fifth section was immunostained with anti-PDX1 or coimmunostained with anti-PDX1 and anti-Glucagon. Quantification of pancreatic epithelium area (PDX1 + area) was performed using AxioVision Imaging analysis software (version 4.6.3). The data were presented as averages ± SEM (μm 2 ) of three independent pancreata. Statistical analysis was performed using the Student's two-sample t test and significance is regarded as p ≤ 0.05.

Pancreatic organ culture and DAPT treatment
Sel1l +/bgeo mice were intercrossed to generate embryos of defined genotypes: wild-type (Sel1l +/+ ), heterozygous (Sel1l +/bgeo ) and homozygous (Sel1l bgeo/bgeo ). The day of the vaginal plug was taken as embryonic (E) day 0.5. Pancreatic bud dissection and culture were performed essentially as described [63]. Briefly, E11.5 embryos were decapitated and the dorsal pancreatic rudiment together with surrounding mesenchymal tissue was removed in PBS. The dissected pancreatic buds were rinsed once in culture medium, transferred to a fibronectin-coated 8well LabTek chamber slide with the epithelial side touching the bottom of the slide and cultured for 72 hours in basal medium with Earle's salts (Gibco 21010-046), 1 × glutamine, 10% FBS and antibiotics. The cultured pancreatic rudiments were fixed individually for 30 minutes in 4% paraformaldehyde in PBS for immunohistological analysis. DAPT treatment of cultured pancreatic explants was performed essentially as described [64]. DAPT stock solution was prepared at a concentration of 10 mM in DMSO and was aliquoted into single-usage aliquots. For Notch inhibition experiments, pancreatic buds were cultured in complete medium containing 10 μM of DAPT. Control pancreatic buds were cultured in complete medium containing 0.1% DMSO. The DMSO or DAPT-treated pancreatic buds were briefly fixed and analyzed by immunostaining. Additional file 2: Sel1l-deficient pancreatic epithelium exhibits impaired growth, branching morphology and differentiation ex vivo. The dorsal pancreatic bud of wild-type (+/+) and Sel1l bgeo/bgeo (-/-) embryos were isolated at E11.5 and cultured as described in Materials and Methods. Cultured pancreatic explants were immunostained with the indicated antibodies. Sel1l-deficient pancreatic epithelium grows poorly and displays impaired branching morphology (B and D), as compared to wild-type control explants (A and C). Scale bar: 100 μm. Click here for file [ http://www.biomedcentral.com/content/supplementary/1471-213X-10-19-S2.TIFF ]