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Fig. 1 | BMC Developmental Biology

Fig. 1

From: Computational prediction and experimental validation of novel Hedgehog-responsive enhancers linked to genes of the Hedgehog pathway

Fig. 1

Definition of GLI binding motifs (GBM) and characterization of GLIFLAG datastets. a Sequence logos (Weblogo) of 12-mer GBM. High confidence (HC), medium confidence (MC), and low confidence (LC) GBM are found in all four (HC), three or two (MC) or one (LC) datasets. b Relative frequency of peaks containing one or more GBM in the GLIFLAG ChIP-chip LD (red), CD (blue), MB (green), and GLIFLAG ChIP-seq NP (yellow) datasets. A high proportion of sequences contain only one GBM. c Overlap of sequences identified by all four GLIFLAG datasets; only 26 individual peaks are found in all contexts

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