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Table 1 Sequences containing Sry and its flanking regions

From: Conservation analysis of sequences flanking the testis-determining gene Sry in 17 mammalian species

Species

Source

Sense

Start

End

5’

3’

Antelope [52]

Genbank:NW_005810830

+

454 385

455 107

454 kb

470 kb

Bat [53]

Genbank:NW_005357697

+

131 171

131 827

131 kb

3.5 kb

Chimpanzee [54]

panTro3:chrY

+

23 812 571

23 813 185

  

Cow [55]

bosTau7:chrY

-

42 225 210

42 225 899

  

Ferret

Genbank:NW_004577527

+

1 715

2 374

1.7 kb

250 kb

Goat [11]

Genbank:EU581862

+

3 458

4 180

3.5 kb

2.3 kb

Horse

Genbank:AC215855

+

166 197

166 904

166 kb

12 kb

Human [56]

hg19:chrY

-

2 655 030

2 655 644

  

Macaque [14]

Supplementary Data 1

-

81 625

82 236

11 Mb

81 kb

Marmoset

Genbank:AC221052

-

165 854

166 537

50 kb

165 kb

Mouse [57]

mm9:chrY

-

1 918 381

1 919 568

  

Pig [58]

Genbank:NW_003612981Genbank:NW_003536874

+, −

33 265, 122 106

33 975, 122 816

33 kb, 20 kb

70 kb, 122 kb

Rabbit [59]

Genbank:HM230423a

-, +

3 435,

61 035

4 058,

61 658

90 kb, 60 kb

3 kb, 30 kb

Sheep [60]

Gebank:Z30265b, Genbank:AF026566c

+, +

1

723

4.8 kb

 

Tiger [61]

Genbank:NW_006712469

+

8 618

9 322

8.6 kb

13 kb

Walrus

Genbank:NW_004451818

-

15 244

15 906

110 kb

16 kb

Whale [62]

Genbank:NW_006729534

-

97 353

97 967

11 kb

97 kb

  1. Genomic sequences used in this study. Sense indicates the strand where Sry is located in each species, with Start and End indicating the position of the Sry coding region within the sequence. 5’ and 3’ provide an estimate of how much flanking sequence is available in each direction. Sequences listed without citation are unpublished
  2. aHM230423 contains two copies of Sry
  3. bZ30265 contains the sheep CDS only
  4. cAF026566 contains sheep 5’ flanking sequence only