From: An automated system for quantitative analysis of Drosophila larval locomotion
Parameter | Unit | Definition of Parameter |
---|---|---|
Animal shape | ||
Body Length | mm | The length of the midline of the larva measured using all frames. |
Body Length Contracted | mm | Body length measured using a subset of frames when the larval length reaches the local minimum during a stride. 1 |
Body Length Extended | mm | Body length measured using a subset of frames where the larval length reaches the local maximum during a stride. 1 |
Time Head Bending | % | Percentage of time when the larva has a head angle of over 45 degrees. 2, 3 |
Time Body Bending | % | Percentage of time when the larva has a body angle of over 45 degrees. 2, 3 |
Time Bending | % | Percentage of time when the larva has either its head or body angle over 45 degrees. 2, 3 |
Peristalsis movement | ||
Speed | mm/sec | The positional change of the center point over time. 2, 4 |
Time Striding | % | Percentage of time when the larva is striding. 2, 3 |
Speed Striding | mm/sec | Speed measured using a subset of frames when the animal is striding. 1, 2, 4 |
Stride Duration | sec | Time duration of one stride. 1, 2 |
Stride Distance | mm | Distance traveled by the center point during one stride. 1, 2, 4 |
Contraction Rate | mm/sec | The rate of body length change during the contraction phase of a stride. 1, 2 |
Extension Rate | mm/sec | The rate of body length change during the extension phase of a stride. 1, 2 |
Stamina | ||
Stride Count | counts/min | Total number of strides over the video length. 3 |
Run Distance | mm | Average distance traveled in a run. A run is defined as a period when the animal is striding continuously. 3 |
Run Duration | sec | Average time duration of a run. 3 |
Run Stride Count | counts/min | Average number of strides of a run. 3 |
Run Count | counts/min | Total number of runs over the video length. 3 |
Track | ||
Distance | mm/min | Total distance traveled by the center point over the video length. 3 |
Direction Change | % | Percentage points on the track where the animal is changing its direction. 3 |
Time Inside | % | Percentage of time the animal is away from the plastic ring. 3 |