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Table 1 Tag counts for endoderm and ectoderm genes in the endoderm and ectoderm SAGE libraries.

From: A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE)

gene symbol tag sequence Early Endoderm (108579) Foregut (102972) Hindgut (110529) Neural tube (97364) Anterior neuropore (103594) Posterior neuropore (102196)
endoderm genes
Cxcr4 TGAATGAGTGTCTAGGC 5 1 6 2 2 2
Ecad TAATGTTGCTAGAGTGA 9 9 8 0 0 1
Foxa1 TTAACGACAAAAAAAAA 5 4 1 0 1 0
Foxa2 GTGAAATCCAGGTCTCG 8 6 9 1 2 0
Foxa3 CTGCTATGCACCAAGAT 2 1 3 0 0 0
Gata4 CCTGCCCCTCCTCCACA 1 2 1 0 0 0
Gata6 TACACAATAATTTTTTT 3 6 3 0 0 0
Hhex TATATAGCATTACTTCT 2 4 1 0 0 0
Ihh GGAGAATTTTGGGAATG 2 0 4 0 0 0
Shh TTCTTGGAAACCAAGAC 11 10 7 1 0 0
Sox17 CGTGTTTTCTCAATCTT 21 2 8 0 0 0
ectoderm genes
Fgf15 ACTTGTTTTCTACATTA 0 0 0 1 4 2
Hes5 TGGGAGAACACAGGCTG 0 0 0 1 3 2
Ncad TTAATATCTTTCGTTAT 0 0 1 3 2 3
Pax6 GATTTAAGAGTTTTATC 0 0 0 4 1 1
Sox2 TATATATTTGAACTAAT 1 3 1 6 5 10
Sox3 TACCTGCCACCTGGCGG 0 0 0 3 4 3
Zic2 TGATGTTTCAGTGCTTT 0 0 0 6 4 4
Zic3 AATAACAGAAAAGTGGA 0 0 0 1 1 0
  1. The total number of tags in each library is bracketed in the column heading.