Table 1 putative regulatory elements and their position relative to the nuclear polyadenylation signal (NPS)
gene (transcript variant) | CPE-like sequence (distance from NPS) | Class I/II ARE-like motif (distance from NPS) |
|---|---|---|
ACTB | UUUUUAAU (340 nt) | AUUUA (447 nt) |
AURKA | UUUUAAAU (5 nt) | none |
BCAR4 (v1) | UUUUUAU (633 nt) | none |
BCAR4 (v1) | UUUUAAU (686 nt) | Â |
BCAR4 (v2) | UUUUAAU (12 nt) | none |
CCNB1 | UUUUAAU (overlapping) | AUUUAUUUA (5 nt) |
CDC2 | none | AUUUA (57 nt) |
ID2 | UUUUUAU (35 nt) | AUUUA (402 nt, 295 nt, 163 nt) |
ID3 | UUUUUAU (19 nt) | AUUUA (85 nt) |
MATER | none | none |
MELK | UUUUUAAU (17 nt) | AUUUA (87 nt) |
MELK | UUUUUAAAU (106 nt) | Â |
NALP9 | none | none |
PRDX1 | none | none |
PRDX2 | none | none |
RNF18 | UUUUAU (3 nt) | AUUUA (overlapping with CPE) |
STELLA | UUCUAAU (24 nt) | AUUUA (536 nt) |
ZAR1 | none | none |