From: Histone deacetylase expression patterns in developing murine optic nerve
Gene | Accession number | Primer | Sequence (5′ to 3′) | Product length (bp) | Slope | SE (Slope) | Efficiency (%) | SE (Efficiency) | Pearson correlation |
---|---|---|---|---|---|---|---|---|---|
Hdac1 | NM_008228.2 | Forward | TGGGGCTGGCAAAGGCAAGT | 133 | -3.586 | ±0.588 | 95.0% | ±0.200 | -0.996 |
Reverse | GACCACTGCACTAGGCTGGAACA | ||||||||
Hdac2 | NM_ 008229.2 | Forward | CGTACAGTCAAGGAGGCGGCAA | 97 | -3.361 | ±0.551 | 99.0% | ±0.223 | -0.996 |
Reverse | TGAGGCTTCATGGGATGACCCTGG | ||||||||
Hdac3 | NM_010411.2 | Forward | ACGTGCATCGTGCTCCAGTGT | 150 | -3.416 | ±0.42 | 98.0% | ±0.163 | -0.997 |
Reverse | AGTGTAGCCACCACCTCCCAGT | ||||||||
Hdac4 | NM_207225.1 | Forward | AGCTCTGGCAACGTCAGCACT | 114 | -3.347 | ±0.631 | 99.5% | ±0.258 | -0.993 |
Reverse | AAGTGGGGCGACTGAGCCTTCT | ||||||||
Hdac5 | NM_001077696.1 | Forward | ACGTAAATGTGGCGTGGACAGGA | 147 | -3.227 | ±0.264 | 102.0% | ±0.119 | -0.999 |
Reverse | TTCAACAGCATCAAACCCAGCGGA | ||||||||
Hdac6 | NM_010413.3 | Forward | TGGGGCTTCAAGGGCTGGATCT | 148 | -3.098 | ±0.380 | 105.0% | ±0.192 | -0.997 |
Reverse | TGCTCTCTGATGGCATGGAGCC | ||||||||
Hdac7 | NM_001204275.1 | Forward | GCTCAGCATGTGCATGTGGAACAC | 132 | -3.276 | ±0.520 | 101.0% | ±0.226 | -0.995 |
Reverse | TGAGAGCCTGGTGTGTCTGGCT | ||||||||
Hdac8 | NM_027382.3 | Forward | ATGACACCAGTGGTCGGCAA | 105 | -3.263 | ±0.656 | 101.5% | ±0.288 | -0.994 |
Reverse | ACGAGCCGTGTTGGCAAGGTT | ||||||||
Hdac9 | NM_024124.3 | Forward | TGCACCTTTGCCTCAGAGCACG | 150 | -3.373 | ±0.239 | 99.0% | ±0.096 | -0.999 |
Reverse | TGGCTGCCTGGTTGCTTCAGT | ||||||||
Hdac10 | NM_199198.2 | Forward | TAGCAGCCAAACATGCCAAGCAGA | 143 | -3.289 | ±0.329 | 100.5% | ±0.0131 | -0.998 |
Reverse | ATGCTCATAGCGGTGCCAAGAGAAA | ||||||||
Hdac11 | NM_144919.2 | Forward | GCTGGGAAATGGGGCAAGGTGA | 134 | -3.125 | ±0.728 | 104.5% | ±0.358 | -0.992 |
Reverse | AGCTCGTTGAGATAGCGCCTCGT | ||||||||
Sdha | NM_023281.1 | Forward | GGACAGGCCACTCACTCTTAC | 130 | -3.493 | ±0.496 | 96.5% | ±0.181 | -0.997 |
Reverse | CACAGTGCAATGACACCACG | ||||||||
Srp14 | NM_009273.4 | Forward | TCGAGCCCGCAGAAAACA | 145 | -3.223 | ±0.373 | 102.0% | ±0.169 | -0.998 |
Reverse | CTCTTCTTCAGCCCGTCCAT | ||||||||
β2-Microglobulin | NM_009735.3 | Forward | TCGCGGTCGCTTCAGTCGTC | 135 |  |  | 105.1% |  |  |
 |  | Reverse | CATTCTCCGGTGGGTGGCGTG |  |  |  |  |  |  |