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Table 3 Biological processes enriched among genes associated with Sox6 peaks

From: Genome-wide mapping of Sox6 binding sites in skeletal muscle reveals both direct and indirect regulation of muscle terminal differentiation by Sox6

GO term

Pvalue

GO:0015629~actin cytoskeleton

2.58E-013

GO:0008092~cytoskeletal protein binding

4.27E-013

GO:0005856~cytoskeleton

4.51E-012

GO:0003779~actin binding

2.93E-011

GO:0030016~myofibril

3.88E-008

GO:0043292~contractile fiber

7.80E-008

GO:0044430~cytoskeletal part

1.67E-007

GO:0030054~cell junction

6.40E-007

GO:0045944~positive regulation of transcription from RNA polymerase II promoter

1.40E-006

GO:0045893~positive regulation of transcription, DNA-dependent

2.93E-006

GO:0051254~positive regulation of RNA metabolic process

3.50E-006

GO:0007517~muscle organ development

5.48E-006

GO:0030017~sarcomere

5.82E-006

GO:0043228~non-membrane-bounded organelle

6.45E-006

GO:0043232~intracellular non-membrane-bounded organelle

6.45E-006

GO:0006357~regulation of transcription from RNA polymerase II promoter

7.81E-006

GO:0007010~cytoskeleton organization

8.98E-006

GO:0010628~positive regulation of gene expression

1.05E-005

GO:0045941~positive regulation of transcription

1.25E-005

GO:0045935~positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

1.37E-005

GO:0044449~contractile fiber part

1.39E-005

GO:0010557~positive regulation of macromolecule biosynthetic process

1.59E-005

GO:0060537~muscle tissue development

1.77E-005

GO:0031328~positive regulation of cellular biosynthetic process

2.01E-005

GO:0009891~positive regulation of biosynthetic process

2.50E-005

GO:0007507~heart development

2.69E-005

GO:0048729~tissue morphogenesis

2.78E-005

GO:0051173~positive regulation of nitrogen compound metabolic process

2.88E-005

GO:0042692~muscle cell differentiation

3.41E-005

GO:0006936~muscle contraction

3.79E-005

  1. The thirty most enriched Gene Ontology (GO) biological process terms are listed.