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Table 2 Q-rtPCR validation of 11 genes from the CRY list

From: Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling

Rank in array

Gene name

Lens (L/S)

CLT

(R/S)

  

qPCR

qPCR

array

1

Cryba1

37009.6

38.5

4.5

3

Crygb (sim)

75864.3

7.3

8.1

4

Crybb3

45918.7

7.8

6.2

6

Cryaa

95666.6

17.9

1.1

7

Glb1

7.6

0.8

1.3

8

Cugbp1b

41.8

1.3

2.4

15

Ccdc124

3.62

1.5

1.1

18

Crybb1

22333.3

5.0

9.6

26

Wnt7a

39193.7

0.5

1.1

29

Fzd7*

5.9

3.9

1.3/2.7

36

Kif19

2.1

0.5

1.2

  1. Bold numbers indicate upregulation of more than 1.5 fold, numbers in italics indicate down regulation and normal font indicates no significant change. * appears twice in CRY list. L/S shows the relative (fold higher) expression in lens when compared to sham operated corneas. Likewise R/S shows relative expression in corneas undergoing CLT when compared to sham operated control corneas.