From: Prediction of microRNAs affecting mRNA expression during retinal development
CE-RSCs | P4 | Adult | |||
---|---|---|---|---|---|
Gene | miRNAs | Gene | miRNAs | Gene | miRNAs |
CUGBP2 | 153; 24; 183; 378; 33; 30-3p; 342 | ACVR2A | 27; 96; 29; 128; 196; 150; let-7/98; 124.1; 125/351; 362; 378 | ACVR2A | 503; 27; 96; 448; 378; 29; 196; 125/351; 150; 124.1; let-7/98 |
KPNA4 | 142-5p; 33; 153; 378; let-7/98; 183; 24 | TNRC6B | 362; 184; 27; 124.1; 9; 204/211; 378; 485-5p; 150; 29; 22 | TNRC6B | 150; 503; 378; 448; 9; 184; 485-5p; 29; 204/211; 124.1; 27 |
ZNF148 | 183; 125/351; 370; 142-5p; 24; 378; 153 | NFIB | 125/351; 331; 22; 128; 485-5p; 124.1; 29; 27; 9; 24 | RICTOR | 196; 448; 124.1; 96; 503; 326; 27; let-7/98; 204/211; 29 |
CLCN5 | 30-3p; let-7/98; 378; 24; 142-5p; 153 | ZNF148 | 34b; 196; 204/211; 378; 124.1; 24; 128; 370; 125/351; 27 | CLCN5 | 448; 503; 378; 9; 29; 24; let-7/98; 27; 485-5p |
CPEB4 | 142-5p; 33; 342; 125/351; 153; let-7/98 | MECP2 | 34b; 22; 204/211; 378; let-7/98; 196; 326; 96; 124.1 | HMGA2 | 196; 125/351; 204/211; 9; 485-5p; 503; 150; 326; let-7/98 |
DAGLA | 153; 183; 485-3p; 125/351; 24; let-7/98 | RP11-130N24.1 | 362; 96; 9; 29; 125/351; 196; 27; 34b; 124.1 | ZNF148 | 204/211; 196; 124.1; 34b; 125/351; 24; 448; 27; 378 |
EPHA4 | 153; 125/351; 33; 30-3p; let-7/98; 183 | SP1 | 125/351; 29; 24; 27; 326; 378; 22; 128; 124.1 | CPEB3 | 196; 125/351; 503; 29; let-7/98; 9; 27; 34b |
NARG1 | 153; 378; 33; 342; 30-3p; 370 | ZBTB39 | 9; 128; 485-5p; 22; 124.1; let-7/98; 27; 331; 370 | MECP2 | 326; 34b; 378; let-7/98; 96; 196; 124.1; 204/211 |
PTPRD | 485-3p; let-7/98; 30-3p; 153; 24; 142-5p | ATXN1 | 125/351; 29; 9; 370; 326; 96; let-7/98; 34b | NFIB | 124.1; 448; 485-5p; 29; 9; 24; 27; 125/351 |
ACVR2A | 125/351; 153; 378; let-7/98; 183 | CCNJ | let-7/98; 196; 27; 128; 204/211; 370; 125/351; 96 | RP11-130N24.1 | 9; 125/351; 124.1; 27; 29; 196; 96; 34b |
BTBD7 | 342; 30-3p; 153; 378; 142-5p | CLCN5 | 29; 9; 485-5p; 378; 24; 128; 27; let-7/98 | AKT3 | 124.1; 150; 503; 29; 448; 326; 125/351 |
CPEB2 | 153; 33; let-7/98; 183; 142-5p | CPD | 196; 204/211; 370; 128; 150; let-7/98; 331; 27 | ATXN1 | 34b; 125/351; 326; 96; let-7/98; 29; 9 |
DDX3X | 30-3p; 33; 370; 183; 342 | CPEB3 | 128; 9; let-7/98; 125/351; 196; 29; 27; 34b | BRPF3 | 96; 326; 204/211; 125/351; 27; 503; 9 |
E2F3 | 125/351; 153; 370; 378; 342 | HMGA2 | 196; 150; 485-5p; 204/211; 326; 125/351; 9; let-7/98 | BSN | 448; 124.1; 24; 125/351; 150; 9; 503 |
FBXO33 | ; 142-5p; 30-3p; 342; 33; 153 | IGF2BP1 | 370; 331; let-7/98; 196; 24; 96; 326; 9 | CCND2 | 29; 196; 503; 96; let-7/98; 448; 124.1 |
MLL2 | ; 142-5p; 342; let-7/98; 370; 33 | QKI | 128; 485-5p; 9; 125/351; 370; 24; 124.1; 27 | CCNJ | 204/211; 27; 503; 196; 96; 125/351; let-7/98 |
PDE4D | ; 183; 33; 24; 378; 485-3p | RICTOR | 27; 196; 96; 204/211; 29; 326; 124.1; let-7/98 | KLF13 | 9; 96; 125/351; 29; 448; 124.1; 378 |
QKI | ; 24; 370; 33; 125/351; 142-5p | RIMS4 | 9; 96; 22; 27; 362; 127; 326; 331 | MGA | 326; 124.1; 378; 29; 9; let-7/98; 485-5p |
RNF165 | ; let-7/98; 153; 24; 33; 142-5p | STC1 | 485-5p; 124.1; 9; 125/351; 22; 378; 34b; 96 | ONECUT2 | 27; 29; let-7/98; 485-5p; 9; 96; 503 |
RSBN1 | ; 342; 183; 153; 378; 485-3p | BRPF3 | 27; 9; 96; 128; 125/351; 204/211; 326 | PAPPA | 27; 96; 150; let-7/98; 503; 448; 326 |
SETD7 | ; 485-3p; 153; 33; 125/351; 342 | CPEB4 | 362; 96; 125/351; 128; 9; 27; let-7/98 | PTPRD | 24; 124.1; 204/211; 29; 503; let-7/98; 448 |
SIX4 | ; 153; 378; 33; 30-3p; 142-5p | DCX | 27; let-7/98; 128; 29; 362; 9; 96 | QKI | 125/351; 124.1; 9; 503; 24; 485-5p; 27 |
SLC4A4 | ; 153; 125/351; 370; 142-5p; let-7/98 | DTNA | 9; 124.1; 378; 22; 24; 27; 128 | RNF165 | 124.1; 448; let-7/98; 485-5p; 150; 29; 24 |
SOX11 | ; 125/351; 153; 33; 142-5p; 485-3p | FRMD4A | 29; 9; 204/211; 128; 124.1; 96; 34b | SP1 | 326; 124.1; 125/351; 29; 378; 27; 24 |
SP1 | ; 24; 125/351; 485-3p; 378; 33 | GABBR2 | 128; 9; 22; 378; 326; 204/211; 370 | STC1 | 485-5p; 378; 34b; 124.1; 9; 125/351; 96 |
STC1 | ; 125/351; 30-3p; 142-5p; 378; 183 | ISL1 | 27; 29; 128; 96; 9; 362; 378 | ZFHX4 | 204/211; 96; 503; 485-5p; 448; 27; 9 |
THRAP1 | ; 485-3p; 142-5p; 183; 153; 24 | KLF12 | 34b; 370; 204/211; 124.1; 29; 9; 27 | ACCN2 | 9; 29; 326; 125/351; 124.1; 27 |
YOD1 | ; let-7/98; 183; 24; 30-3p; 125/351 | MGA | 378; 485-5p; 326; 29; let-7/98; 9; 124.1 | APPBP2 | 9; 448; 378; 27; let-7/98; 29 |
ZFPM2 | ; 183; 142-5p; 485-3p; 153; 33 | MITF | 27; 331; 34b; 378; 124.1; 485-5p; 96 | CPEB4 | 448; 9; 27; 125/351; 96; let-7/98 |
ARID4B | ; 370; 183; 378; 142-5p | MMP16 | 150; 27; 370; 24; 124.1; 9; 96 | CUGBP2 | 96; 326; 34b; 378; 196; 24 |